| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3510 |
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| Symbol | tspO |
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| ID | 5713741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3690440 |
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| End bp | 3690922 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641269439 |
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| Product | tryptophan rich sensory protein |
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| Protein accession | YP_001534844 |
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| Protein GI | 159046050 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3476] Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATTTG ATTGGATCGT CTTCGGTGTC TTCATCAGTG CCTGTTGCGC CGCGGCGGCA
ACGGGTTCCA TGTTTCCGCC CGACAAGTGG TACGACGCCT TGCGCAAACC GTCCTGGAAC
CCGCCCAACT GGGTGTTCCC GGTGGTGTGG TCCATCCTCT ACATCGTGAT CGCCGTGGCC
GCCACGCGGG TCGCCGTGCT CGATGGTAAC GCGCTCGCCA TGGCCTTCTG GGGCCTGCAA
ATCGCGCTCA ATACGCTCTG GTCGCCGGTC TTTTTCGGTC TGAACCGGAT CAAGGCGGGG
ATGTTCATCA TCGTCGCGCT CTGGCTCGCC GTGTGCGGCG CGATGGTCAG CGCCTGGCAG
ATCGACATGG TTGCGGGCCT GTTGCTGGCC CCCTATCTCG TCTGGGTGTC GATCGCGGCG
GCCCTGAACG CGGCGGTCTG GCGGCTCAAC CCCGACAAGG CGGGCGGCCC CGCCACCGCC
TAA
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| Protein sequence | MEFDWIVFGV FISACCAAAA TGSMFPPDKW YDALRKPSWN PPNWVFPVVW SILYIVIAVA
ATRVAVLDGN ALAMAFWGLQ IALNTLWSPV FFGLNRIKAG MFIIVALWLA VCGAMVSAWQ
IDMVAGLLLA PYLVWVSIAA ALNAAVWRLN PDKAGGPATA
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