| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3508 |
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| Symbol | crtI |
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| ID | 5713739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3687777 |
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| End bp | 3689351 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641269437 |
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| Product | phytoene dehydrogenase |
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| Protein accession | YP_001534842 |
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| Protein GI | 159046048 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.691648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.885719 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACAC GAGTCGACCC CATCTCCGCC GCCGAAGCCG TCACCGGCCC CCGTCAACGC
GCCATCGTGA TCGGCGCCGG TCTCGGGGGG TTGGCCGCCG CCATGCGCCT CGGCGCCAAG
GGCTACGCCG TCACCGTTCT GGACAAGCTC GACCGGACCG GCGGGCGCGG CTCCTCGATC
TCCCAGGACG GGCACCGCTT CGACCTGGGC CCCACGATCA TCACCGTCCC CCAAGTCTAC
GAGGCCCTGT GGGAGGCCTG CGGCCGCAAC TTCCACGACG ATGTTACGCT CAAGCCGCTC
GACCCGTTCT ACGAGATCCG CTGGCCTGAC GGCTCCAACT TCTTCGCCCG CCAATCGACC
GAGGCGATGG AGGCCGAGAT CACCCGCCTC TCCCCCGGCG ACCTGAAAGG CTATCGCCAG
TTCCTCAAGG ATTCCCAGCG CCGCTATGTC GTGGGGTTCG AAGGCATGGT GGCCGAGCCG
ATGCACAAGG CCTGGGACAC GATCAAGGTC CTGCCCGAGT TTGCCCTCCT GCGCGCCGAC
CAGTCGATCC TGAAACTGGC CAAGAAACGG GTTAAGGACG CCCGCCTGCG CATGGCGCTG
TCGTTCCATC CGCTCTTCAT CGGCGGCGAC CCGATGAACG TCACCTCCAT GTATGCCCTC
GTCAGCCACC TGGAAAAGGA ATTCGGCGTC CATTACGCCA TGGGCGGGGT GCAGGCGATC
GCCGACGCCA TGGCCCGGAT CGTGGCCGAC CAGGGTGGCT GGGTCCGCCT GGGCGAGACC
GTAGACGAAA TCCTCGTGAC CGAACGCAAA ACCCGCGGCG TCCGCCTCGC CAGTGGCGAG
GTGCTGCATG CGGATGTGGT CGTCTCCAAC GCCGATGCGG GCCACACCTA CAAACACCTC
ATGCGTCAGG CCCCCAAGAA ACGCTGGACC AACGCCAAGC TCGACAGCCG CCGCTGGTCC
ATGGGTCTTT TCGTGTGGTA TTTCGGCACC AAGGGCACCG CCGGCATGTG GCAGGATGTG
GGCCACCACA CCATCCTCAG CGGCCCGCGC TACGAGGGCC TGCTGCGCGA CATCTTCATC
AACGGGCGGC TCTCCGACGA CATGAGCCTC TATGTCCACC GCCCCTCGCT CACCGATCCC
AGCGTGGCAC CCAAGGGCGA CGACACCTTC TACGTCCTGT CGCCGGTCCC CCATCTGGGC
CATGACAATG GCGTCGACTG GGCGACCGAG GAACCGATCT ACAAGGCCAA GGTGCTGGCC
GAGCTGGAAA AGACCATGCC CGGCATCGGG CGGCGCATCA CCACCGAAAC GGTGTTCACG
CCGGAAACCT TCCGCGACAG GTATCTCTCG CCCAACGGCT CCGGCTTTTC CATCGAACCG
CGCATCCTGC AATCGGCCTG GTTCCGACCC CATAATGTCT CCGAAGAGGC CGAGGGCCTG
TTCCTCGCCG GCGCGGGCAC CCATCCGGGC GCAGGCGTGC CCGGCGTGAT CAGCTCGGCC
GAGGTGCTGG CCAAGATGGT CCCCGACGCC GCCCCCGTCG CCACCCCGGC CCCCCTCGCG
CAGGCCGCGG AATGA
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| Protein sequence | MMTRVDPISA AEAVTGPRQR AIVIGAGLGG LAAAMRLGAK GYAVTVLDKL DRTGGRGSSI
SQDGHRFDLG PTIITVPQVY EALWEACGRN FHDDVTLKPL DPFYEIRWPD GSNFFARQST
EAMEAEITRL SPGDLKGYRQ FLKDSQRRYV VGFEGMVAEP MHKAWDTIKV LPEFALLRAD
QSILKLAKKR VKDARLRMAL SFHPLFIGGD PMNVTSMYAL VSHLEKEFGV HYAMGGVQAI
ADAMARIVAD QGGWVRLGET VDEILVTERK TRGVRLASGE VLHADVVVSN ADAGHTYKHL
MRQAPKKRWT NAKLDSRRWS MGLFVWYFGT KGTAGMWQDV GHHTILSGPR YEGLLRDIFI
NGRLSDDMSL YVHRPSLTDP SVAPKGDDTF YVLSPVPHLG HDNGVDWATE EPIYKAKVLA
ELEKTMPGIG RRITTETVFT PETFRDRYLS PNGSGFSIEP RILQSAWFRP HNVSEEAEGL
FLAGAGTHPG AGVPGVISSA EVLAKMVPDA APVATPAPLA QAAE
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