| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3491 |
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| Symbol | |
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| ID | 5713722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3672445 |
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| End bp | 3674289 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641269420 |
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| Product | ATPase |
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| Protein accession | YP_001534825 |
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| Protein GI | 159046031 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTCC TGTCCCGGAT CGAGAACCTG ATCGACGGTT TCCAACCCGC CGAAGGGCCG
CCGCCCCAGA CCCTGTGGGC GTTCCTGCGA TGGTGCCTGA GCGGATCGAT GCCGGTGCTC
TGGATCGCCG CCGCGCTCTC GGCCTTCGCC GGCACGCTGG AGGTGTTGTC CGCCACCCTT
CTGGGCCTCG TGATCGACAC CGCGCTCACC GCCGGCCCGG AGGGCTTCTT TGCAAGTGAA
TGGCCCACGG TTCTTCTGTT CGCGGCCTTC TTCATCCTGA TCCGCCCGGT GATTTTCGGA
CTGTCCTCGG CGGCCAATGC GATCGTGGTA CAACCCAATC TCAACCCGCT GGTGCTGTCG
CGCCTGCACC GCTGGACCAT GGGCCAGTCG GTCAGCTTCT TCGATAACGA CTTCGCCGGT
CGCATCGCGC AGAAGCAGAT GCAGACCGCC CGCGCCGTCA CCGACATCAC CGCCGAGGTG
ATCAACGTGG TCGCCTTCGC GCTGGCCTCG ATCCTCGGCT CGGTGATCCT GCTGCTGACC
ATCGACCCCT GGGTCGCGCT GGCGCTCGGC GTCTGGTTCG TGGCCTACAT GGCGCTGATC
CGGGCTTTCC TGCCGCGCGT GCGCAAACGC TCCGCCGCCC GCGCCGGGGC CCGCGCCAAC
GTGACGGGCC AGGTGGTCGA CACAGTCACC AACATCAAGA CGGTCAAGCT GTTCGGCCAT
TCCGAACATG AAGACCAGGC CGCCCTCGAC GCCATGGGCA GCTACCGGCG CAAGGCGCTC
GATTTCGGCT ATATCTCGTC GAGCTTCCGG TTCTGGCTCA TGGCCATCGC CGGGGTGCTG
CCGGTGCTGC TGATCGGCGG GACGCTGATC CTGTGGACAC AAGGCACTGC CACGCCAGGC
GACATCGCCG CCGCCGGGGC CATCGCCATC CGCATCGCCC AGATGACCGG CTGGGTCAGC
TTCACGCTCA TGGCAATCTA CGCGAATGTG GGCGAGGTGG AGGACGGGAT GCGCACCCTG
ACCGTGCCCC ATGCCCTGAC CGATGCCGAC GACGCCAGCG AGATGGAGGC CCGGCGCGGC
CGCATCACCT TCGAGAACGT GACCTTCATG TATGGCCGCG ACGTGGGCGG GATCGACGGG
ATCTCCCTGA CCGTGGCGCC GGGGCAGAAA CTGGGCCTGG TGGGCGCGTC GGGGGCCGGG
AAATCGACCC TGACCGGGCT GCTCTTGCGG CTCTACGACA CCGAAGAGGG GCGCGTGACC
ATCGACGGGG TCGATGTGCG CGACGTGACG CAAGACAGCC TGCGCCAGCA GATCGCCATG
GTCACCCAGG AAACCGCCAT GTTCAATCGC TCCGCGCGGG ACAACATCCT CTATGGCCGC
CCCGACGCGA CCGAGGCCGA GATGATCGCC GCGGCCAAGC GCGCGGAGGC CCATGACTTC
ATCATGGACA TGCAGGATCA TGCGGGCCGC AAGGGGTACG ATGCCCATCT GGGCGAGCGC
GGCGTGAAGC TCTCGGGCGG TCAGCGGCAG CGCATCGCGC TGGCCCGTGC CTTCCTCAAG
GACGCGCCGA TCCTCGTGCT GGACGAGGCG ACCTCGGCGC TCGACAGCGA AGTGGAGGCG
TCGATCCAGG ACGCGCTCGA CCGGGTGATG GAGGGAAAGA CCGTCATCGC CATCGCCCAC
CGCCTCTCGA CCATCGCGCA GATGGACCGC ATCGTCGTGC TGGACCAGGG CCGCGTGGTC
GAGGACGGCA CCCATACCGA CCTGCTGGCC CAGGGCGGGC TCTACGCGCG CTACTGGAAC
CGGCAGTCGG GCGGGTTCAT CGGCCTGACC GAGGCTGCCG AATAA
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| Protein sequence | MTLLSRIENL IDGFQPAEGP PPQTLWAFLR WCLSGSMPVL WIAAALSAFA GTLEVLSATL
LGLVIDTALT AGPEGFFASE WPTVLLFAAF FILIRPVIFG LSSAANAIVV QPNLNPLVLS
RLHRWTMGQS VSFFDNDFAG RIAQKQMQTA RAVTDITAEV INVVAFALAS ILGSVILLLT
IDPWVALALG VWFVAYMALI RAFLPRVRKR SAARAGARAN VTGQVVDTVT NIKTVKLFGH
SEHEDQAALD AMGSYRRKAL DFGYISSSFR FWLMAIAGVL PVLLIGGTLI LWTQGTATPG
DIAAAGAIAI RIAQMTGWVS FTLMAIYANV GEVEDGMRTL TVPHALTDAD DASEMEARRG
RITFENVTFM YGRDVGGIDG ISLTVAPGQK LGLVGASGAG KSTLTGLLLR LYDTEEGRVT
IDGVDVRDVT QDSLRQQIAM VTQETAMFNR SARDNILYGR PDATEAEMIA AAKRAEAHDF
IMDMQDHAGR KGYDAHLGER GVKLSGGQRQ RIALARAFLK DAPILVLDEA TSALDSEVEA
SIQDALDRVM EGKTVIAIAH RLSTIAQMDR IVVLDQGRVV EDGTHTDLLA QGGLYARYWN
RQSGGFIGLT EAAE
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