| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3476 |
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| Symbol | pcaG |
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| ID | 5712534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3659505 |
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| End bp | 3660119 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641269405 |
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| Product | protocatechuate 3,4-dioxygenase alpha chain |
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| Protein accession | YP_001534810 |
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| Protein GI | 159046016 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02423] protocatechuate 3,4-dioxygenase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTGCAAG CCCTCTCATA TCTGAAGGAA ACCCCGTCCC AGACCGCAGG CCCATATGTG
CATATCGGCT GCACCCCGAA CCATGCCGGG CTGACCGGGT TTTATGATAC TGATCCCGGC
GCAGTGCTGA AAACAGGCTC TGTCAAAGGG CAAGAGATCA CTTTGCGGGG CACGATCTTC
GACGGGGCGG GCGCGCCGCT GCGTGATGCG ATGGTCGAGA TCTGGCAGGC CGACGCGGCA
GGTCGCTTCG CCTCTGGCGA CCCGCGCGGC GGGGCCGATC CGCATTTCAC CGGCTGGGGG
CGCTGCGCTT GCGATGCCGA TACCGGAGAG TTTGGCTTCG AGACCGTCAA ACCGGGGCGC
GTGCCCTTCA TCGACGGGCG GTTGCAGGCA CCCCATATCA GCCTGTGGAT CGTGGCCCGA
GGGATCAACC TCGGGCTGCA GACCCGAGCC TATTTCGCCG ATGAGGTGAC TGCCAATACC
GAAGACCCGA TCCTGAGCCG GATCGAGCAT CGCCACCGCA TCCCCACCCT GCTGGTCCTG
CCCGAAGCTT CGGGCGTTTA CCGGTTCGAC ATCCACCTGC AAGGGGATCG CGAGACGATC
TTCTTCGACT TCTGA
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| Protein sequence | MVQALSYLKE TPSQTAGPYV HIGCTPNHAG LTGFYDTDPG AVLKTGSVKG QEITLRGTIF
DGAGAPLRDA MVEIWQADAA GRFASGDPRG GADPHFTGWG RCACDADTGE FGFETVKPGR
VPFIDGRLQA PHISLWIVAR GINLGLQTRA YFADEVTANT EDPILSRIEH RHRIPTLLVL
PEASGVYRFD IHLQGDRETI FFDF
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