Gene Dshi_3475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3475 
Symbol 
ID5712533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3658656 
End bp3659495 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content66% 
IMG OID641269404 
Productprotein of unknown function DUF849 
Protein accessionYP_001534809 
Protein GI159046015 
COG category[S] Function unknown 
COG ID[COG3246] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCA AACCCTGCAT CATCTGCGTC GCCATCACTG GCTCCGTCGC CACGAAATCC 
GCCAACCCCG CGGTGCCGAT TACCGTGGCC GAACAGGTCG AGAGCACGCA CGAAGCCTTC
GAGGCGGGCG CCAGCATCTG CCACGCCCAT GTGCGCAACG ACGATGAAAC GCCGTCCAGT
GACCCGGAGA AATTCGCGCG TCTGCAGGAA GGGCTGCAGA AGCACTGCCC GGGCATGATC
ATTCAGTTCT CCACCGGCGG TCGGTCCGGC GCTGGGCGGG AACGGGGCGG GATGCTGCCC
CTGCGCCCGG ACATGGCGTC GCTGACAGTG GGGTCGAACA ACTTCCCCAC GCGGGTCTAC
GAGAACCCGC CCGACCTGGT GGACTGGCTG GCGTCGGAAA TGCGGGCCCA TGAGGTGATC
CCAGAAATCG AAGCCTTCGA TCTGAGCCAT ATTCACCATG CGGCCCTGAT GCATCGGGAC
GGGCGGTTGG CGACCCGTCC CTATATCCAG TTCGTGATGG GGGTGAAGAA CGCGATGCCG
GTGGATCGCG AGACATTCGA TTTCTATCGC GCGACAGTGG AGCGGCTCTT GCCCGGGGCG
GAGTGGTGCG GGGCGGCAAT CGGGGCGAGC CAGATCGTCA TGAACGAATG GTGCGTGGCC
GAAGGTGGGC ATGCGCGTAC GGGGCTCGAA GACAACGTGC GGCTGGACCG CGAGACCCTG
GCGCCGTCCA ATGCGGCACT GGTGCGGCGG GTGGTCGAGT TGTGTAATCA GTACGAGCGC
CCGGTGGCCG ACCCGGCGCA AGCGCGCGAG ATCCTGGGGC TGCGACCCGT GGCGGCTTAA
 
Protein sequence
MTGKPCIICV AITGSVATKS ANPAVPITVA EQVESTHEAF EAGASICHAH VRNDDETPSS 
DPEKFARLQE GLQKHCPGMI IQFSTGGRSG AGRERGGMLP LRPDMASLTV GSNNFPTRVY
ENPPDLVDWL ASEMRAHEVI PEIEAFDLSH IHHAALMHRD GRLATRPYIQ FVMGVKNAMP
VDRETFDFYR ATVERLLPGA EWCGAAIGAS QIVMNEWCVA EGGHARTGLE DNVRLDRETL
APSNAALVRR VVELCNQYER PVADPAQARE ILGLRPVAA