| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3470 |
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| Symbol | |
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| ID | 5712528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3652890 |
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| End bp | 3653921 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641269399 |
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| Product | peptidase M48 Ste24p |
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| Protein accession | YP_001534804 |
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| Protein GI | 159046010 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCATC CGGAACAGGT CATCCTCGGT ACCGCGGTCA GCGGTGGCAC CTCTCTCCAG
GTCGCGGCGC GTCTTCTGGT GCGCGGGGAT ATGGCCAAGT TAATCGCGGT GGAGACCGGT
GGAACCATGG CCGAGGCCCG GCTGGACGCG GTGAGGTTCG ATCCGCCGCT GGGGTCGCTG
CCACGCAAGC TGCGCTTCCC GGACGGTGCC GAGTTCGAAA CGGGGGACCG CGAGGCGATT
GCCGCGTTGG AGCCGCGCGG CTTCTGGACC CGGCTGCACG GATGGGAACG GCTGCATCCG
CGCCTGATCC TGTTCGTGGT TGGCGGATTC GCGGGCGGCT GGCTGGTCTA TTCCGTGGCC
CTCACCGCAC TGGTTGCCAT GGCTGTCGCC CTGACACCGG AGCCCCTCGT GCGGGCGATG
GATCGCAGTA CCCTCTCCGC CCTCGACCGC GTCATTGCCT CCGAAACAGC GCTGAGTACA
GCAGATCAAG CCGAGGCTCG CGCGATTTTC GAGGACCTGC GCGCGGTTCT GCCGGACCGC
GACCTCGCGG AAGCCGTGAG CCTGGAGTTT CGGGCGCTCC GGGGTTTGGG ACCGAATGCG
CTGGCCCTGC CCGGGGGCAC CGTGGTGTTG TCGGATGCCT TGGTTAAGCA GTTCGATGCT
GATGTCGTCG CCTCGGTGCT CGGCCATGAG ATCGCCCATG TGATGGAGGA ACACTCCCTC
AAGCGGCTCT ATCGGTCGCT GGGCATCTAC GTGATGGTCG CCCTGATCGC CGGGGAAACC
GGGCCTTTGC TCGAGGATCT TCTGCTGGAG GGGAATGTGC TGCTGTCGCT GTCCTACTCC
CGCGGGCAGG AGGCGGAGGC GGATCAGATC GGCCTGCGGC TCGCCGACGC CGCAGGGTAT
GATCCGACCG GGTTGAAGGT ATTTTTTGAA ACGCTCGCGG CCGAGGTCGG AGACGGCGGT
GGCTGGCTGT CCACCCATCC GGGCAATGAC GACCGCATCG AGGCAATCGA TGCCTATCTG
GAGGCGCGCT AG
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| Protein sequence | MAHPEQVILG TAVSGGTSLQ VAARLLVRGD MAKLIAVETG GTMAEARLDA VRFDPPLGSL
PRKLRFPDGA EFETGDREAI AALEPRGFWT RLHGWERLHP RLILFVVGGF AGGWLVYSVA
LTALVAMAVA LTPEPLVRAM DRSTLSALDR VIASETALST ADQAEARAIF EDLRAVLPDR
DLAEAVSLEF RALRGLGPNA LALPGGTVVL SDALVKQFDA DVVASVLGHE IAHVMEEHSL
KRLYRSLGIY VMVALIAGET GPLLEDLLLE GNVLLSLSYS RGQEAEADQI GLRLADAAGY
DPTGLKVFFE TLAAEVGDGG GWLSTHPGND DRIEAIDAYL EAR
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