| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3464 |
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| Symbol | hrcA |
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| ID | 5712522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3644431 |
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| End bp | 3645495 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641269393 |
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| Product | heat-inducible transcription repressor |
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| Protein accession | YP_001534798 |
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| Protein GI | 159046004 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAGG CAAGCAAGGT CATATCGGAG ATGAGCGACC GCTCCCGCGA GGTGTTTCGC
CGGGTGGTGG AGGGGTATTT GCAGACCGGC GACCCGGTCG GCAGCCGGAC CTTGACCCGG
TCCATGAGCG AGAAGGTTTC GGCAGCGACG ATCCGTAACG TGATGCAGGA CCTGGAATTT
CTGGGCCTGC TCGATTCGCC CCACGTCTCC AGCGGCCGTA TTCCGACCCA GATGGGCCTG
CGGATGTTCG TGGATGGCCT TCTCGAAATC GGCAACCTGT CCAGCGAAGA CCGGGAGGTC
ATCGAATCCT CCGCGGGCGA GAATGACAGC GTTGGCGGCC TGTTGGACCG GGTCGGTTCG
GCCCTGTCGG GTATCACGCA GGGGGCCAGC CTTGTGCTTG CGCCCAAGAA CGAAAGCGCC
CCCATCAAGC ATGTCGAATT CGTCAGCCTT GCGCCGGGCC GGGCCCTGGC CGTGCTGGTA
TTTGCCGATG GGCAGGTTGA AAACAGGGTG TTTACGCCGC CCGCGGGGCA AACCCCGTCC
TCCATGCGGG AGGCGGCGAA TTTCCTCAAC GCAGTGGCAG AGGGGCGCAG TCTGTCGGAA
CTGGCGGATG TCATTCGTCG AGAGATCGCG TCGCGGCGGT CCGAACTGGA CCGGCTGGCC
GCGGACATGG TGGAGGCTGG CACGGCCGTC TGGCAGGATC CGGGCGAATC GAACGAACGA
CTGATCGTGC GGGGACGTGC CAATCTTTTG GGCGATGGAC CGCCATCGGA GGACCTGGAA
CGGGTGCGCA AGCTTTTCGA TGATCTGGAA CGCAAACGCG ACATCGCGGC CTTCCTGGAT
CTGGCCGAGG CCGGGGAAGG TGTGCGCATT TTTATCGGTT CGGAGAACAA GCTTTTCTCA
CTTTCGGGTT CCTCTCTGGT TGTCAGTCCT TATATGAACG CGGACCGGAA GATCATCGGA
GCCGTGGGTG TGATCGGGCC GACTCGCCTC AACTACGGGC GGGTTGTGCC GGTGGTCGAA
TACACGGCGC AACTGGTCGG CAAGATCTTG GGCGACCGGG CATAG
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| Protein sequence | MDEASKVISE MSDRSREVFR RVVEGYLQTG DPVGSRTLTR SMSEKVSAAT IRNVMQDLEF
LGLLDSPHVS SGRIPTQMGL RMFVDGLLEI GNLSSEDREV IESSAGENDS VGGLLDRVGS
ALSGITQGAS LVLAPKNESA PIKHVEFVSL APGRALAVLV FADGQVENRV FTPPAGQTPS
SMREAANFLN AVAEGRSLSE LADVIRREIA SRRSELDRLA ADMVEAGTAV WQDPGESNER
LIVRGRANLL GDGPPSEDLE RVRKLFDDLE RKRDIAAFLD LAEAGEGVRI FIGSENKLFS
LSGSSLVVSP YMNADRKIIG AVGVIGPTRL NYGRVVPVVE YTAQLVGKIL GDRA
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