| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3463 |
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| Symbol | rph |
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| ID | 5712521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3643582 |
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| End bp | 3644295 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641269392 |
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| Product | ribonuclease PH |
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| Protein accession | YP_001534797 |
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| Protein GI | 159046003 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACCGT CAGGACGTCA AACCCATGAG ATGCGCGGCG TCTCGATCGA AACTGGCTTC
ACCAGGCACG CCGAAGGATC CTGCCTGATC TCAATGGGTG AAACACGCGT GTTGTGCACC
GCCTCCGTTG AGGAGCGCGT GCCGCCGTTT CTGCGTAACA CCGGTCTTGG CTGGGTGACG
GCGGAATATG GAATGTTGCC CCGCGCAACC CATACCCGCG GGCGCCGGGA AGCTGCCGCT
GGGAAGCAAT CGGGGCGCAC CCAGGAGATC CAGCGCCTAA TCGGACGGAG CCTCCGCGCG
GGGGTCGACC GCGTGGCGCT GGGAGAGCGG CAGATCACCA TCGATTGCGA TGTGATCCAG
GCCGATGGCG GCACACGCTG CGCGTCGATC ACCGGGGCCT GGGTCGCGCT GAGGCTTGCC
GTCAACAAGC TGATGAAGGC GGGCGATATC ATTACGGACC CGCTGACAGA TCACGTAGCC
GCGGTGTCCT GTGGTCTCTA CGCCGGGCAA CCCGTACTGG ATCTGGATTA TGCGGAGGAT
TCCGAGGCCG GGACCGACGC GAATTTCGTG ATGACCGGCT CCGGCGGTCT GATCGAGGTG
CAAGGTTCGG CCGAGGGTGC GCCGTTCTCG CGCAATGCCC TCAACACGCT GATGGACCTT
GCCGAGGTCG GTGTTGCCGA GCTGGTCGCC GCACAGAAGG CCGCCACCAG CTGA
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| Protein sequence | MRPSGRQTHE MRGVSIETGF TRHAEGSCLI SMGETRVLCT ASVEERVPPF LRNTGLGWVT
AEYGMLPRAT HTRGRREAAA GKQSGRTQEI QRLIGRSLRA GVDRVALGER QITIDCDVIQ
ADGGTRCASI TGAWVALRLA VNKLMKAGDI ITDPLTDHVA AVSCGLYAGQ PVLDLDYAED
SEAGTDANFV MTGSGGLIEV QGSAEGAPFS RNALNTLMDL AEVGVAELVA AQKAATS
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