| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3461 |
|---|
| Symbol | |
|---|
| ID | 5712519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 3642591 |
|---|
| End bp | 3642968 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641269390 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_001534795 |
|---|
| Protein GI | 159046001 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGCC TGATTTCCAC GGGTTCCCCC TTCGAGGCCA CCATGGGATA TTCCCGAGCC
GTGGTTCAGG GCGATTGGTG TTTCCTGTCG GGCGTCACCG GGTACGATTA TGCGGCAATG
ACTCTGCCGA ACGTTTTCGA AGACCAGGTA AATAATTGTT TTAAAACAAT TTTTGAAGTA
TTGAGGGAAG CGGATTTCCC AAAAGACAGC ATCTGCAAGG TCCAGTATAT CCTTGCGGAT
CGCGGTCTCG TCCAAACAGT TGCGCCCCTA CTCGGTCGGC ATCTCGGTGA GGTCCGTCCC
GCGGCCACCA TGATCATTGC CGGTTTAATC GAACCCCAGA TGTTGATCGA AATCGACGTG
ACCGCATTCA AGGGTTGA
|
|---|
| Protein sequence | MRRLISTGSP FEATMGYSRA VVQGDWCFLS GVTGYDYAAM TLPNVFEDQV NNCFKTIFEV
LREADFPKDS ICKVQYILAD RGLVQTVAPL LGRHLGEVRP AATMIIAGLI EPQMLIEIDV
TAFKG
|
|---|
| |