| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3460 |
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| Symbol | hemN3 |
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| ID | 5712518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3641425 |
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| End bp | 3642588 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641269389 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_001534794 |
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| Protein GI | 159046000 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGATT GGCAACACGG GGGCTTCGGG CTGTACCTTC ATTGGCCTTT CTGCGCTGCC
AAGTGCCCCT ATTGCGACTT CAACAGCCAT GTCAGGGCAC GCGTGGATCA AGCAGCGTGG
GAAAACGCCT TCTTGTCGGA AATCGGCCGT GCCGGAATAG AAACGGAAGG TCGCCGCCTC
GATACGGTTT TTTTCGGCGG AGGCACCCCT TCATTGATGG AACCGGACCT CGTGGCTTCC
ATCATCGACA GGATCCGGCG AACTTGGCCC ACCTCCAACA GTCTTGAAAT CACACTGGAG
GCAAACCCCA CATCCGTCGA GGCCGGGCGG TTTCGCGCCT ATCGGGATGC AGGGGTGAAC
CGGGTTTCGA TGGGTATCCA GGCCCTGAAC GACGCGGACC TGAAGGCTTT GGGACGATTG
CACTCGGTCA AGGAGGCGCA AAGCGCATTT GAGGTCGCGC AAGCGCATTT CGAGCGCGTG
AGCTTCGATC TGATCTACGC ACGACAAGGT CAAACGCTGG AAGCCTGGAT TGCAGAGCTT
AGGGCAGCTC TCTCCATGGC GATTGATCAT CTTTCTCTCT ATCAGTTGAC CGTGGAGCCA
GGCACCGCGT TTGGAGATCG CGCTGCTCGG GGCATGTTGC GCGGATTGCC GGATGGTGAC
TTGGGCGCCG ACATGTTCGA AGCAACCCAA GACCTGTGTT CCGATGCGGG AATGCCGGCC
TACGAAGTGT CGAACCACGC AGCTGAGGGC TGCGAATCCC GCCATAACCT GATCTATTGG
CGGTATGGGG ATTACGTTGG CATCGGCCCG GGCGCCCATG GGCGCCTTAC CCTATCCGGA
CAGAAATGGG CCACCTCCAC CCCGTTGCAC CCCGAAGCTT GGCTGGCTCA AGTTCAGGAT
AGCGGGCATG GCGAAACTCC AAGGCAGCTT CTGACACCGA ATGAGATCTC CGAAGAGCTC
CTGCTCATGG GCTTACGGCT GTCGGAGGGT GTGTCTCTGA ACCGGATCAC CGCTATCGCC
GGAGCACCTC TGCCGGAACG AAAACTCTCC GAACTCCAGG AAGCGCAACT CATACGGGTG
GACGGCGACC GGTTGCGCAC CACTTTACAA GGGCGCATGG TGCTGAACGC CATTCTGCGG
GAACTTCTGA GCGAGGACAG ATGA
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| Protein sequence | MEDWQHGGFG LYLHWPFCAA KCPYCDFNSH VRARVDQAAW ENAFLSEIGR AGIETEGRRL
DTVFFGGGTP SLMEPDLVAS IIDRIRRTWP TSNSLEITLE ANPTSVEAGR FRAYRDAGVN
RVSMGIQALN DADLKALGRL HSVKEAQSAF EVAQAHFERV SFDLIYARQG QTLEAWIAEL
RAALSMAIDH LSLYQLTVEP GTAFGDRAAR GMLRGLPDGD LGADMFEATQ DLCSDAGMPA
YEVSNHAAEG CESRHNLIYW RYGDYVGIGP GAHGRLTLSG QKWATSTPLH PEAWLAQVQD
SGHGETPRQL LTPNEISEEL LLMGLRLSEG VSLNRITAIA GAPLPERKLS ELQEAQLIRV
DGDRLRTTLQ GRMVLNAILR ELLSEDR
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