| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3455 |
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| Symbol | gidA |
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| ID | 5712513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3636905 |
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| End bp | 3638764 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641269384 |
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| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
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| Protein accession | YP_001534789 |
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| Protein GI | 159045995 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
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| TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACAAC AGGCTTTTGA TGTCATCGTC ATTGGAGGGG GCCATGCAGG TACCGAGGCC
GCAGCCGCAG CTGCCCGCCT TGGTGTGCAG GTTGCCCTGA TCACACTCGA AAGATCGGGC
ATCGGTGTGA TGTCTTGCAA TCCGGCGATC GGAGGCCTTG GGAAAGGACA CCTGGTTCGA
GAAATTGACG CGATGGATGG AGTCATGGGA CGGGTCGCGG ACAAGGCCGG CATCCAGTTC
AGGCTTCTCA ATCGTCGGAA AGGGCCGGCC GTGCAGGGGC CGCGGTCTCA ATCGGATCGC
GATGTTTACC GTTCCGAGAT GCTTGCCGAG ATGGAATCGT TGCCCAACTT GCGTATCTTG
GAGGGTGAAG TCGCTGACCT GATTACGTCG GGGACCAGGA TCGAGGGTGT GTGTTTGGCC
GATGGGAGCG AGGTTACCGC TCGAGCGGTC GTTGTTACAA CCGGAACGTT TCTCCGCGGT
ATCATCCACA TAGGGAATCG AAGCTTTCAG GGTGGCAGAA TGGGGGCCGC TCCTTCCGTT
CGTCTTGCTG AAAGGTTTGA CAGTTTCGGT TTGCCCCTTG GGCGATTGAA GACAGGTACT
CCGCCGCGGC TGGATAAACG CAGCATTGCC TGGGATAAAC TGGAACCTCA GCCCGGCGAC
GAGGATCCGA CGCTTTTCTC TTTCCTGTCG GCTGGCCCAC ACTTGCGGCA AGTACACTGC
GCTGTCACTC ACACCAACGA ACGCACCCAC GAAATAATCC GGAAAAACCT CTCGCGATCT
GCGATGTATG GCGGATCCAT TGAAGGTGTT GGGCCGCGGT ACTGCCCGTC CATCGAGGAT
AAAGTGGTTC GGTTCTCCGA CAAAACCTCA CATCAGATCT TTCTAGAGCC TGAGGGTCTT
GACAGTACCA CAATCTATCC CAACGGAATT TCGACCTCGT TGCCGGAAGA TGTACAAGAG
GCGTATGTCC GCAGCATATC CGGATTGGAA AACGCGAAGA TCACTCAGCC CGGTTATGCG
ATAGAATACG ACTATGTGGA TCCACGCGCC CTTGATGCGG CCTTGCGGGT CAAGGGATTT
GACGGCCTAT ACCTTGCGGG GCAAATCAAC GGTACAACAG GATATGAGGA AGCGGCCGCA
CAAGGCTTGG TTGCAGGCTT GAACGCCGCC CTTGAGGGTA AGGGTAAGTT TCTGCCCAGC
CGAATGACGT CTTACATTGG TGTGATGATT GACGACTTGA TTACGCAAGG GGTCGCTGAG
CCTTATCGTA TGTTCACATC GCGTGCAGAG TACAGGCTGT CTTTACGCTG CGATAATGCC
GATCAGCGCT TGACACCAGA GGGTCTTGTT CTTGGGTGCG TGGGCAAAGA ACGCAGGATA
AAGTTCGAAA AGAAGATGGG CCTTTTGGAC GAAACCCTGA AGAAGCTGAA GTCTTTCGAA
GTGACGCCCA AACAAGCGAA CGAGGCTGGC ATACGTGTAA ACGAAGACGG TCGCCGTCGA
AGTGGCCTCG ATCTGCTGTC GCTCTCCAAT GTCAGCTACG AGTCCCTGGC TGCGACCTGG
CCAGAGCTAC AGGCATCGAC AGAGATCGCC AAGCAAGCAA AAATTGAAGC CACTTATGCG
AATTACATTG AGCGACAGCA ACGCGATGTC ATGGCTTTGA AGAAGGATGA AGAGATCGAG
TTTCCACCCC GCTTTGACTT TTCCGGTCTT TCAGGTCTGT CGAACGAGTT GAAATCCAAG
CTGACAGCGG TGCGCCCTTC GACTTTGGGT CAGGCCGCAA GAATAGAAGG CATGACTCCG
GCTGCTCTGA CACTCTTGCT GGCGTCTTTG CGGAAGGCAG AAAAACGGCG TAGCGCGTAG
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| Protein sequence | MKQQAFDVIV IGGGHAGTEA AAAAARLGVQ VALITLERSG IGVMSCNPAI GGLGKGHLVR
EIDAMDGVMG RVADKAGIQF RLLNRRKGPA VQGPRSQSDR DVYRSEMLAE MESLPNLRIL
EGEVADLITS GTRIEGVCLA DGSEVTARAV VVTTGTFLRG IIHIGNRSFQ GGRMGAAPSV
RLAERFDSFG LPLGRLKTGT PPRLDKRSIA WDKLEPQPGD EDPTLFSFLS AGPHLRQVHC
AVTHTNERTH EIIRKNLSRS AMYGGSIEGV GPRYCPSIED KVVRFSDKTS HQIFLEPEGL
DSTTIYPNGI STSLPEDVQE AYVRSISGLE NAKITQPGYA IEYDYVDPRA LDAALRVKGF
DGLYLAGQIN GTTGYEEAAA QGLVAGLNAA LEGKGKFLPS RMTSYIGVMI DDLITQGVAE
PYRMFTSRAE YRLSLRCDNA DQRLTPEGLV LGCVGKERRI KFEKKMGLLD ETLKKLKSFE
VTPKQANEAG IRVNEDGRRR SGLDLLSLSN VSYESLAATW PELQASTEIA KQAKIEATYA
NYIERQQRDV MALKKDEEIE FPPRFDFSGL SGLSNELKSK LTAVRPSTLG QAARIEGMTP
AALTLLLASL RKAEKRRSA
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