| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3450 |
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| Symbol | aroE |
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| ID | 5712508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3631945 |
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| End bp | 3632781 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641269379 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001534784 |
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| Protein GI | 159045990 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAAA TAAAAGTGCC CATAGCCGGG GTGATCGGAA ACCCCATCAC ACATTCCCGG
TCGCCACATC TGCATCGACA TTGGCTGCAC GTCTATGGGA TCGAGGGGTA TTACGTGCCG
CTCCATGTGC AGGGTCAGGA CCTTGCCGAG GTGTTCCACG CTCTGCCGAA GTTGGGGTTC
AAGGGTGTCA ATGTCACCCT ACCCTTCAAA GAACGCGCCA TCGAGCTGGC GGACCGAGTG
TCCGACCGGG CTGCGTTGAT CGGGGCGGCG AACACGATCA CCTTTCAACC TGATGGGACG
ATTCATGCTG ACAATACAGA TGGTTATGGG TTTATCGAAA ATCTGAGGAA CGGGGCACCC
GGCTGGTCGC CGCGCGCAGC AGCCATCGTG GTACTGGGGG CTGGCGGAGC AGCGCGGGGG
GTTTTATCAG CACTCCTCGA AGCGGGCGCA CCGGAAGTTC GCCTGGCCAA TCGGACCCGC
GCCAAGGCAG AGGCTTTGCG CAGTGATTTT GGGCCAAGGG TGACCGTTGT CGACTGGCAC
GGCGTATCTG GCACCATGGA AGACGCAGAG ACCCTCGTCA ATACCACATC ATTGGGAATG
ACCGGCCAGC CTGATCTCGA GCTGAACCTC GATGCGTTGC CCCGTTCTGC GGTGGTGACG
GATATTGTGT ATCGTCCCCT GATGACACCT TTGCTGGAAC AGGCGGTTGC CCGCGGAAAC
CCTGTAGTCG ATGGCCTGGG CATGTTGCTC TTTCAGGCAG CGCCGGGTTT TGAGCGGTGG
TTTGGCGTGC GGCCAGAGAT TACCCCTGAG CTGCGGGCGG CCGCATTGGC AGAATGA
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| Protein sequence | MTEIKVPIAG VIGNPITHSR SPHLHRHWLH VYGIEGYYVP LHVQGQDLAE VFHALPKLGF
KGVNVTLPFK ERAIELADRV SDRAALIGAA NTITFQPDGT IHADNTDGYG FIENLRNGAP
GWSPRAAAIV VLGAGGAARG VLSALLEAGA PEVRLANRTR AKAEALRSDF GPRVTVVDWH
GVSGTMEDAE TLVNTTSLGM TGQPDLELNL DALPRSAVVT DIVYRPLMTP LLEQAVARGN
PVVDGLGMLL FQAAPGFERW FGVRPEITPE LRAAALAE
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