| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3448 |
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| Symbol | dnaQ1 |
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| ID | 5712506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3630667 |
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| End bp | 3631359 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641269377 |
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| Product | DNA polymerase III subunit epsilon |
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| Protein accession | YP_001534782 |
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| Protein GI | 159045988 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGAGA TCGTGCTCGA CACGGAGACG ACCGGATTCG AGCCTTCGGA AGGCGATCGG
TTGGTTGAAA TCGGCGGAGT GGAGCTTTTC AACCATGTGC CTACGGGCCG GGTCTATCAC
CAGTACATAA ACCCCCAACG GAGCATGCCC CAATCCGCCT TTGAAGTGCA TGGGCTTGGT
GACGACTTTC TTGCGGACAA GCCGCTCTTT GCCGAGGTTG CCGAGGCCTT CCTGGATTTC
ATCGGGGATG CGAAACTGGT CATTCACAAC GCCGCGTTCG ACATGAAGTT TCTGAACGCA
GAGCTGGGTT GGCTGGGCAA ACCGCTTCTG CCGATGGAAC AAGCGATTGA TACATTGGCT
ATCGCAAGGC GAAAGTTTCC GGGATCGCCT GCATCTCTCG ACGCATTGTG CCGTCGGTTT
GGTGTCGACA ACTCGGCACG TGAGAAACAC GGGGCGCTGC TGGATTCCGA GATCCTGGCC
GAAGTGTACC TGGAGCTCAT CGGCGGGCAG CAACCGGGGC TGGAGCTGTC GAGTGTACAG
ACCCCGTCCA CACAAAATGT GGATAACGGG CATCTCCGTG CCCGCCCTCG GCCCGCGCCC
TTGCCGTCCC GGGTGTCGGA AAAGGAAAAG GCGGCACATG CCGCCTTTGT CGAATCTCTT
GGGCAGTCCG CGCTTTGGCG CACGGTGACC TGA
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| Protein sequence | MREIVLDTET TGFEPSEGDR LVEIGGVELF NHVPTGRVYH QYINPQRSMP QSAFEVHGLG
DDFLADKPLF AEVAEAFLDF IGDAKLVIHN AAFDMKFLNA ELGWLGKPLL PMEQAIDTLA
IARRKFPGSP ASLDALCRRF GVDNSAREKH GALLDSEILA EVYLELIGGQ QPGLELSSVQ
TPSTQNVDNG HLRARPRPAP LPSRVSEKEK AAHAAFVESL GQSALWRTVT
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