Gene Dshi_3443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3443 
Symbol 
ID5712501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3627203 
End bp3627796 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content64% 
IMG OID641269372 
ProductSmr protein/MutS2 
Protein accessionYP_001534777 
Protein GI159045983 
COG category[S] Function unknown 
COG ID[COG2840] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAGC GACCCCCGAG ACGCCTGCGC CCCGACGAGG AGGAAATCTG GAAGCGTGTT 
GCCGAAACCG CCACGCCCTT GAGCAAGCCG CGGTTTCCGA TGCCGCAGGA TGTGACCCCA
AGCCCGCGCA AGGCTCGATC CCCTGAAAAA GAGCCTATCT CGCCGTTCAG CATCGGGAGT
GGCGCGGGTT TGTCCGAGAC TCACGATCTG GCGCCTGGAC TCGGTGAGCG GATCGCCGCC
GCGCCGGTGA CCATGGATCG CAAGGCCTTC GGCAAGCTCA AACGGGGCAA GTTGAAGCCC
GAGGGGCGGC TGGATCTGCA TGGCATGACG CTGTCTCAGG CGCATCCTGC GCTCAACCGG
TTCATCCTCG GGGCGCATTC CCAGGGCAAG CGCCTGGTTC TGGTGATCAC CGGAAAGGGC
AAGGACCGCG ATCAGGGCGG TCCGATCCCC GAACGTCTCG GCGTTCTGCG CCACCAGGTG
CCCCATTGGC TGTCGATTCC ACCACTGTCC AGCGTCGTGT TGCAGGTTAC AACGGCCCAT
TTGCGCCACG GTGGTGGTGG GGCATATTAC GTGTATCTCA AGAGGCCGCG TTAG
 
Protein sequence
MSKRPPRRLR PDEEEIWKRV AETATPLSKP RFPMPQDVTP SPRKARSPEK EPISPFSIGS 
GAGLSETHDL APGLGERIAA APVTMDRKAF GKLKRGKLKP EGRLDLHGMT LSQAHPALNR
FILGAHSQGK RLVLVITGKG KDRDQGGPIP ERLGVLRHQV PHWLSIPPLS SVVLQVTTAH
LRHGGGGAYY VYLKRPR