| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3441 |
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| Symbol | hslU |
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| ID | 5712499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3624650 |
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| End bp | 3625963 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641269370 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_001534775 |
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| Protein GI | 159045981 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.37686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGACC TGACCCCCCG CGAAATCGTG TCCGAACTGG ATCGGTTCAT CATCGGGCAG
AAGGATGCCA AACGGGCTGT GGCCGTTGCC CTGCGCAACC GCTGGCGCCG CAAACAGCTG
TCGGATGACC TGCGCGAAGA GGTTTATCCC AAGAATATCC TGATGATCGG CCCGACCGGC
GTCGGCAAGA CCGAGATCAG CCGTCGCTTG GCGAAACTGG CACGCGCGCC GTTCATCAAG
GTCGAAGCCA CCAAGTTCAC CGAAGTCGGC TATGTCGGCC GTGACGTGGA ACAGATCATC
CGCGACCTCG TCGAGAACGC CATCACCATG ACTCGCGATC ACATGCGCGA AGAGGTGAAG
GCCAACGCCC ATCAGGCCGC TGAAGAGCGT GTGATCGAAG CCATCGCGGG TTCAGACGCC
CGTGAAGCCA CCCGCGAGAT GTTCCGCAAG AAGCTGAAAG CCGGGGAACT GGACGATACG
GTGATCGAGC TGGAGGTGGC AGATACTTCC AACCCGATGA GCATGTTCGA AATTCCCGGC
CAGCCCGGCA TGAACCCCAT GGGCGGCGGC ATGGATCTGG TTGAGCTGTT CGGCAAGGCG
TTTGGTGGGC GCACCGTGCG CAAGAAGCTG ACTGTGGCAC AGAGCTACGA GGTCTTGATC
AGCGAAGAGG CAGACAAACT GCTGGACGAT GAAGCGGTCA ATCGCAGTGC CGTCACAGCG
GTGGAACAGA ACGGCATTGT CTTCCTCGAC GAGATCGACA AGGTCTGCGC TCGCTCCGAC
GCCCGTGGCG CCGATGTCAG CCGCGAAGGC GTACAGCGTG ACCTGTTGCC CCTGATCGAG
GGCACAACCG TCAGCACGAA GTACGGCCCA GTGAAAACCG ATCATGTGCT GTTCATCGCC
TCCGGCGCGT TCCACATCGC CAAACCTTCG GACCTGCTGC CGGAACTTCA GGGGCGCCTG
CCCATCCGGG TCGAGTTGCG CCCCCTGACC GAACAGGATT TCGTCCGTAT CCTGACCGAG
ACCGACAATG CTCTGACACT GCAATACACC GCGCTGATGG GCACGGAATC CGTCACTGTC
ACCTTCGCCG AGGATGGCAT CGCAGCGCTT GCGCGCATCG CAGCGGAGGT GAACCAATCG
GTGGAGAACA TCGGCGCGCG GCGGCTCTAT ACAGTGATGG AACGGGTGTT CGAGGAACTC
AGCTTCGCCG CTCCGGACCG CTCCGGCGAC GAGATCACCG TGGATGCGGA GTTTGTCGAA
GCCAATCTCG GCGCGCTGAC CCGCGATACC GATCTCAGCC GCTACGTACT CTGA
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| Protein sequence | MTDLTPREIV SELDRFIIGQ KDAKRAVAVA LRNRWRRKQL SDDLREEVYP KNILMIGPTG
VGKTEISRRL AKLARAPFIK VEATKFTEVG YVGRDVEQII RDLVENAITM TRDHMREEVK
ANAHQAAEER VIEAIAGSDA REATREMFRK KLKAGELDDT VIELEVADTS NPMSMFEIPG
QPGMNPMGGG MDLVELFGKA FGGRTVRKKL TVAQSYEVLI SEEADKLLDD EAVNRSAVTA
VEQNGIVFLD EIDKVCARSD ARGADVSREG VQRDLLPLIE GTTVSTKYGP VKTDHVLFIA
SGAFHIAKPS DLLPELQGRL PIRVELRPLT EQDFVRILTE TDNALTLQYT ALMGTESVTV
TFAEDGIAAL ARIAAEVNQS VENIGARRLY TVMERVFEEL SFAAPDRSGD EITVDAEFVE
ANLGALTRDT DLSRYVL
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