| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3439 |
|---|
| Symbol | trxA1 |
|---|
| ID | 5712497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 3623597 |
|---|
| End bp | 3623917 |
|---|
| Gene Length | 321 bp |
|---|
| Protein Length | 106 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641269368 |
|---|
| Product | thioredoxin |
|---|
| Protein accession | YP_001534773 |
|---|
| Protein GI | 159045979 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01068] thioredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCG TTGCCGTAAC CGACGAAACC TTCGACACCG AAGTCACGAA ATCCGACATC
CCCGTGGTGG TGGATTTCTG GGCAGAATGG TGCGGCCCCT GCAAGCAGAT CGGCCCGGCG
CTCGAAGAAC TGAGCGTGAC CTTCGACGGC AAGGTGAAGA TCGCCAAGGT CAACGTGGAC
GAGAACCCGA ACGCCCCCGC ACAGATGGGC GTGCGCGGTA TTCCTGCGCT GTTCCTGTTC
AAGAACGGCG AGGTTGTGTC GAATAAGGTC GGTGCCGCGC CGAAAGCCGC CCTGCAAAGC
TGGATTGAAG AGTCCCTCTG A
|
|---|
| Protein sequence | MATVAVTDET FDTEVTKSDI PVVVDFWAEW CGPCKQIGPA LEELSVTFDG KVKIAKVNVD
ENPNAPAQMG VRGIPALFLF KNGEVVSNKV GAAPKAALQS WIEESL
|
|---|
| |