| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3433 |
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| Symbol | |
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| ID | 5712491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3613670 |
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| End bp | 3614974 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641269362 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001534767 |
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| Protein GI | 159045973 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGCA TGGACTTCAC GCTCTTGGCG ACGCTTCTCG CGGTTGCGTT TCTGACCGCG
GCACTGGCGC TGTATGCGCT CAACACACTT TCAAACCGGG ACTTTGCCCA AGGGCCCGGT
CCTACACTGC CCGTCCGGAC CGATCTCGAC GGGCCAAGCG CAGACCAGAT CACAGCCCAG
CGCCGAGAAC TCGCGCAGCT GCGCGCCACG GTCGAACACA TTCCCCTGAT CCTTTGGCGG
CAGGACAACG ATGGCGCCCT GACCTGGGCC AACAAACCCT ATATCGACCT GACCGAGAAG
CTCCATCCGG ACCGCGCGGG GCGCTGGCCC ATGCCCCACC TGTTCAAACA GAAATCCCTC
GCCCATCCGG ACACCCCTGG ACACCGCCGA ATCTCCATCG ACATGGAGGA TGGCGAGAAG
CGCTGGTTCG AGGTGCAGGG CTTCCGCGTT CAGGACGAAA TTCTCTATTC TGCCACGCCG
ATCGACATGA CCGTGAAGGC CGAGGTTTCA CTCCGCAACT TCGTCCAGAC CCTGACCAGC
ACCTTTGCCC ATCTGCAGGT GGGGCTCGCA ATCTTCGACA AACGGCGCCA GCTGGTGCTG
TTCAACCCGG CACTTACCGA CCTGACCACC CTTGAGCCCG AATGGCTCAG CGCGCGGCCG
GGACTGTCCG AAGTGCTCGA CCGGCTGCGC GACAAGAACA TGCTGCCCGA ACCGAAGGAC
TACAAGGAAT GGCGCAACCG GCTTACCGGG CTGGAAAAGG CCGCCTCTTC CGGCACGTTC
GAGGAAACCT GGGCGTTGCC CACGGGTCAG AACTACCGCA TTCTCGGCCG CCCCCATCAC
GACGGCGGAA TCGCCCTGAC CTTCGAGGAT ATTTCCTCGG AAGTCTCCCT CACACGGCGA
TTCCGTTCCG AGATCGAGCT GGGGCAGACC GCGCTCGACA CGCTGGAAGA GGCAATCGCG
GTGTTCTCGG AAAACGGCAC GCTTGTGCTG TCAAACAAGG CCTATTCCGA GCTTTGGGAT
GTCTCCGAGA ATGACGGACT GATGCCGGTA AGTATCGTGG ATGCCACGCG CCATTGGCAG
CAATCGTGCC AACCCAACCC GATCTGGGGT GACATTCGCG ACTTCGCCAC CACAAGCCAG
GGCCGCGCCG ATTGGGAAGA TTACGCCCGT CTTCAAGATG GCGGCACGAT CCTGCGCTGC
CGGGTGGCGC CGCTCGCCCA GGGCATGACC CTGGTAGGGT TCAAGACCCT CGAAGCCGTG
CCGGAGTTCC AGCCCGCCAA GACCGAGATC GCCCAAACCG CGTGA
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| Protein sequence | MAGMDFTLLA TLLAVAFLTA ALALYALNTL SNRDFAQGPG PTLPVRTDLD GPSADQITAQ
RRELAQLRAT VEHIPLILWR QDNDGALTWA NKPYIDLTEK LHPDRAGRWP MPHLFKQKSL
AHPDTPGHRR ISIDMEDGEK RWFEVQGFRV QDEILYSATP IDMTVKAEVS LRNFVQTLTS
TFAHLQVGLA IFDKRRQLVL FNPALTDLTT LEPEWLSARP GLSEVLDRLR DKNMLPEPKD
YKEWRNRLTG LEKAASSGTF EETWALPTGQ NYRILGRPHH DGGIALTFED ISSEVSLTRR
FRSEIELGQT ALDTLEEAIA VFSENGTLVL SNKAYSELWD VSENDGLMPV SIVDATRHWQ
QSCQPNPIWG DIRDFATTSQ GRADWEDYAR LQDGGTILRC RVAPLAQGMT LVGFKTLEAV
PEFQPAKTEI AQTA
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