Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3420 |
Symbol | glpK |
ID | 5712478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 3599365 |
End bp | 3600924 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641269349 |
Product | glycerol kinase |
Protein accession | YP_001534754 |
Protein GI | 159045960 |
COG category | [C] Energy production and conversion |
COG ID | [COG0554] Glycerol kinase |
TIGRFAM ID | [TIGR01311] glycerol kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGATCGAC AGCGCGGGCA GTTCCTCCTA AACCTGAGGG CGCTGAAGCC ACGACCGGGG GAGGGAACCG TGCGCCACGT GCTCGCCATT GACCAAGGCA CAACTTCGAG CCGCGCCATC GTCTTTGACG CGGATATGAA CATCGTCTCG ATCGCGCAGG AAGAATTTGC GCAGCATTAT CCCGATAGCG GCTGGGTGGA ACACGATCCC GAGGACTTGT GGGATACGGT ATTGCGGACC TGTCGGAATG TGCTCGAAAG GACCGGGCTG GCTGCTACGG ACCTCGCCGG GATCGGGATC ACCAACCAGC GCGAGACGAC CGTGGTTTGG GACAAGTCCA CCGGCAAACC CATCCACAAC GCGATCGTCT GGCAAGACAG GCGCACTGCC CCCTTCTGCG CCGAATTGCG CAAGGCTGGG CATGATGCAC TGATCACGGC GCAGACCGGC CTTCTGGCAG ACCCGTATTT CTCAGGCACC AAGCTGAAAT ACATTCTCGA TACCGTGGAG GGCGCGCGCG ACCGTGCCAA GGCAGGGGAG CTTTTGTTCG GGACCGTCGA CAGTTTCCTC ATCTGGCGGC TGACGAATGG GGCCGCCCAT GTCACCGACG CAACCAACGC GGCGCGCACC ATGCTCTACG ACATCCACAA GGGCGCTTGG AGCGCAGAGA TCTGCACGCT GTTCGATATC CCCCTCGGGA TGCTGCCGCA GGTGCATGAC TGCGATGCAG AGTTCGGGAC CTGCACACCC GAGCATCTGG GCGGCGCGGT TCCGATCCTC GGCGTGGCCG GGGACCAACA AGCCGCCACC ATAGGGCAGG CCTGCTTTGA GCCGGGGATG CTGAAGTCGA CTTATGGAAC GGGGTGCTTT GCGCTTTTGA ACACGGGCGA AGCACCGGTC ACCTCGACCA ACCGGCTTCT CACGACAATC GCCTACCAGC TCGACGGAAA ACCAACCTAT GCGCTCGAAG GCTCGATTTT CGTGGCCGGT GCGGTGGTGC AATGGCTCCG CGACGGGCTG AAATTGATCG CCAACGCGTC CGAGACGCAG CCGCTGGCCG AGGCCGCCGA TCCCCATGAT CCCGTGATCC TCGTGCCAGC CTTCACCGGC CTCGGGGCGC CCTACTGGAA TGCGGAGTGT CGCGGGGCGG TCTTTGGCCT CTCGCGCGGG TCGGGTCCGG AAGAGTTCGC CCGCGCCGCC CTAGAAAGCG TCGGTTATCA GACCCGCGAC CTGCTGGAAG CCATGCATAA GGACTGGTCC GATGCCCGCG AAGGGCAACC GACCCTGCGG GTGGATGGTG GCATGACCGC AAGCGACTGG ACCATGCAAT TCCTCGCCGA CATCATCGAC GCGCCAGTCG ACCGTCCGAA GATCACGGAA ACCACCGCGC TGGGTGTCGC CTGGCTCGCC GGGCAGAAGG CCGGGCTGTA CCCGGATCGC GCGGGCTTTG CAGCCAACTG GGCTCTGGAT CAGCGGTTCG AGCCCAAGAT GGACGCCACC ACACGCGATA CGAAATACGC AGCCTGGAAA CGCGCCGTCG CCGCCGTGCA ACAAGCCTGA
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Protein sequence | MDRQRGQFLL NLRALKPRPG EGTVRHVLAI DQGTTSSRAI VFDADMNIVS IAQEEFAQHY PDSGWVEHDP EDLWDTVLRT CRNVLERTGL AATDLAGIGI TNQRETTVVW DKSTGKPIHN AIVWQDRRTA PFCAELRKAG HDALITAQTG LLADPYFSGT KLKYILDTVE GARDRAKAGE LLFGTVDSFL IWRLTNGAAH VTDATNAART MLYDIHKGAW SAEICTLFDI PLGMLPQVHD CDAEFGTCTP EHLGGAVPIL GVAGDQQAAT IGQACFEPGM LKSTYGTGCF ALLNTGEAPV TSTNRLLTTI AYQLDGKPTY ALEGSIFVAG AVVQWLRDGL KLIANASETQ PLAEAADPHD PVILVPAFTG LGAPYWNAEC RGAVFGLSRG SGPEEFARAA LESVGYQTRD LLEAMHKDWS DAREGQPTLR VDGGMTASDW TMQFLADIID APVDRPKITE TTALGVAWLA GQKAGLYPDR AGFAANWALD QRFEPKMDAT TRDTKYAAWK RAVAAVQQA
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