| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3415 |
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| Symbol | gcp |
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| ID | 5712473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3593049 |
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| End bp | 3594119 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641269344 |
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| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
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| Protein accession | YP_001534749 |
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| Protein GI | 159045955 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCCT CTCTGACCGT TTTGGGTATC GAAAGCAGCT GCGATGACAC CGCGGCGGCG
GTCTTGCGCG GACCCGAGGT GCTGTCTTCG GTCGTTTATG GCCAGACGGC GCTGCATGCG
GCTTTCGGTG GCGTCGTGCC CGAGTTGGCC GCACGCGCAC ATGTCGAGAA GCTGGATATC
GCCGTCGCGG CGGCCCTGTC GGAGGCGGTT CTGGCGCTCG ATCAGATCGA TGTGATCGCG
GTGACCGCGG GGCCGGGGCT GATCGGTGGG GTACTGTCGG GCGTCATGTT GGCCAAGGGA
CTTTCAGCGG CGTCGGGCGT GCCGCTCATC GGGGTGAACC ACCTCGCGGG TCATGCGCTG
ACGCCGCGAT TCACCGATGG GCTGGCGTTT CCCTACCTGA TGCTGCTGGT CTCTGGGGGT
CATTGCCAGT TTCTGCGCGT GGAAGGGCCA GAGGCATTCC ATCGCTTGGG CGGCACCATT
GATGACGCGC CGGGGGAGGC TTTCGACAAG ACTGCCAAGC TCCTCGGCCT GCCACAACCG
GGGGGGCCTG CCGTCGAGGC GGAGGCCCGG GCGGGCGATC CCGCGCGTTT TGTCTTCCCA
CGGCCACTGC TGGACCGGGC TGGGTGCGAC ATGTCCTTTT CCGGGTTGAA GACGGCCCTT
CTGCGGGCTC GGGACGGTCT GGTGTCGGCG GGCGGCGGCC TGACAGCGCA GGATCGGGCC
GATCTCTGCG CCGGGTTCCA GGCGGCGATC TGTGACGTAC TGGTGGAAAA ATCGCGACGC
GCCCTGACCC AGTCCGAAGG CGTGACCGGC TTCGCGGTGG CTGGCGGCGT GGCGGCAAAT
GAGCAGGTTC GGTCCGGCTT GGCCCGGTTG GCTGCGGAAC TGGATGCTCC GTTTGTCGCA
CCGCCGCTGC GGTATTGCAC CGATAATGCG GCGATGATCG CCTGGGCTGG GCAGGAGGCG
TTCTCTGCTG GTGCGCGCTC TGGTCTGGAT CTGTCGGCGC GCCCGCGTTG GCCGCTGGAT
AACAGCCAGC CTGCGCTCCT GGGTTCAGGC AAGAAGGGCG CCAAGGCGTG A
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| Protein sequence | MTPSLTVLGI ESSCDDTAAA VLRGPEVLSS VVYGQTALHA AFGGVVPELA ARAHVEKLDI
AVAAALSEAV LALDQIDVIA VTAGPGLIGG VLSGVMLAKG LSAASGVPLI GVNHLAGHAL
TPRFTDGLAF PYLMLLVSGG HCQFLRVEGP EAFHRLGGTI DDAPGEAFDK TAKLLGLPQP
GGPAVEAEAR AGDPARFVFP RPLLDRAGCD MSFSGLKTAL LRARDGLVSA GGGLTAQDRA
DLCAGFQAAI CDVLVEKSRR ALTQSEGVTG FAVAGGVAAN EQVRSGLARL AAELDAPFVA
PPLRYCTDNA AMIAWAGQEA FSAGARSGLD LSARPRWPLD NSQPALLGSG KKGAKA
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