| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3414 |
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| Symbol | gpsA |
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| ID | 5712472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3592090 |
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| End bp | 3593052 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641269343 |
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| Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_001534748 |
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| Protein GI | 159045954 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.422156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGCAGG CGATCGATGT CATGGGGGCG GGGGCATTTG GATCGGCGCT GGCCATTGCG
CTGAGCCGTG ATGGCAGTGA CGTCACCCTC TGGGCCCGGT CGTCGGAGCA GGTCGCGGCC
CTGCGAGAGA CTAGAGAGGT CGCACGCCTG CCGGGGGTGA TTCTGCCGAA AGAGTTGCGG
ATTACGTCCG ATGCCGGGGC ATTGGGCGCG CCGATCCGCC TGCTGGCCAT TCCGATGCAG
GCTCTGGCAC AACATCTGCA ATTGTTGCCG GCGCGCGGTG GCACGGCCTT GGTCGCGTGC
TGCAAGGGTA TCGACCTGTC CACGGGCCTC GGTCCAACGG GGCTGATCGC GCGCGATGCG
CCGGGCTGCG TGGCCGCGGT CCTGACGGGG CCGAGCTTCG CCGCGGATAT CGCGCGCGGC
TTGCCGACGG CGCTGACCCT GGCGTGTGCT GATGCGCAGG CGGGCGCGAA GCTCCAGTCC
GCGCTGTCGA CCGAGACATT GCGGCTTTAC CGCAGCACGG ACCCAACCGG GGCGGAATTG
GGCGGCGCGC TCAAGAACGT CATCGCGATA GCGGCAGGTA TGGTGATCGG GGCGGGCCTC
GGCGAGAGCG CGCGTGCGGC CCTGCTGACG CGGGGCTACG TGGAAATGCA GCGCCTCGCT
CTCCACATGG GGGCGCGGCC AGAAACCCTG GCGGGCCTGT CGGGGTTTGG GGACATGGTT
CTGACGGCCA CCTCGGGCCT GTCGCGCAAC TTCACTTTCG GCCGCGCCCT TGGAGCCGGC
AGCGCCCCAT CGCAAGGGGC GACCGTCGAA GGGCGCGCGA CGGCCCGCGC TGTGGCCCGA
ATTGCGGCAG ATCAAGGAAT CGACATGCCG ATTTGCACGA TGGTATCCGC GGTATTGGAA
AACACACTGA CCATAGAGCA GGCAACCGCG GCGCTTCTGG CCCGGGATCT GCGAGAGGAA
TGA
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| Protein sequence | MTQAIDVMGA GAFGSALAIA LSRDGSDVTL WARSSEQVAA LRETREVARL PGVILPKELR
ITSDAGALGA PIRLLAIPMQ ALAQHLQLLP ARGGTALVAC CKGIDLSTGL GPTGLIARDA
PGCVAAVLTG PSFAADIARG LPTALTLACA DAQAGAKLQS ALSTETLRLY RSTDPTGAEL
GGALKNVIAI AAGMVIGAGL GESARAALLT RGYVEMQRLA LHMGARPETL AGLSGFGDMV
LTATSGLSRN FTFGRALGAG SAPSQGATVE GRATARAVAR IAADQGIDMP ICTMVSAVLE
NTLTIEQATA ALLARDLREE
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