| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3410 |
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| Symbol | dsbE |
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| ID | 5712468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3588621 |
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| End bp | 3589190 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641269339 |
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| Product | thiol:disulfide interchange protein DsbE |
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| Protein accession | YP_001534744 |
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| Protein GI | 159045950 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
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| TIGRFAM ID | [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0176012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTG CCCTTTTCGC CTTGCCGGTG GTTCTGGTTC TGATCCTCGG AGGGTTCTTC
CTCTGGGGGT TGAACCCCGA TCGGGATCCA AACGCGATCC CCTCGGTTCT GATCGATGCC
CAGGCACCGG AGTTTGCTTT GGACGGTATC CCGGGTCTGG ATACGCCGGG CCTTGCCAAA
GCGGATCTTT CGGGCGCCGA CAACCCGCTG GTGGTGAATG TCTTCGCGTC CTGGTGTGTG
CCCTGTAGGG CAGAGCATGC GGTACTGACC CGCATGGCGC GAGAGGAGAA TATCCACCTG
CTCGGCATCA ATTACAAGGA CAAGCCCGAG GATGCGGTGC GCTGGCTCGA TGAGCTTGGT
AATCCATATG AACGCATCGG TGCGGACCTG ACTGGCCGCG TCGGCATCGA ATGGGGCATC
TCGGGCGTGC CGGAAACCTT TGTGATCGAT GCCAACGGGA TCGTGGTCTA CCGGTTCGTC
GGGCCGATCT TGAGCGCCGA GGATGTGCGG GATATGCAGG AGGCCATCGC GCTTGCCCGG
TCGCGCAGCG GGGCCGGAGG AACATCATGA
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| Protein sequence | MKRALFALPV VLVLILGGFF LWGLNPDRDP NAIPSVLIDA QAPEFALDGI PGLDTPGLAK
ADLSGADNPL VVNVFASWCV PCRAEHAVLT RMAREENIHL LGINYKDKPE DAVRWLDELG
NPYERIGADL TGRVGIEWGI SGVPETFVID ANGIVVYRFV GPILSAEDVR DMQEAIALAR
SRSGAGGTS
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