| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3408 |
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| Symbol | cycH |
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| ID | 5712466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3586961 |
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| End bp | 3588142 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641269337 |
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| Product | cytochrome c-type biogenesis protein CycH |
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| Protein accession | YP_001534742 |
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| Protein GI | 159045948 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.285071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTGGG TAATCGGCGG CGTTCTTGCC GCGATTTCGG TGTTGGTGCT TGTCTTGCCG
GCGTGGCGCA AGCGTGGCGA AGCTCTCGGT CGCGACGAAA GCGCGATGGA GATTTTCAAG
GATCAGTTGT CGGAAGTGGA TCGGGACGAG GCACGTAACC TCATTTCCGG CGATGAGGCT
ACCGCGGCGC GGTCCGAGAT CAAGCGCCGG ATGCTTGCAA TCACGAAACG GCAGGGAAAC
ACTACCAAGG CAAAATCCGC CTCCGGCGGC GTCACGGTTC TGGTGGTTTC AGCCCTGGCG
ATTCCGGTTC TGGGCTTTGT GCTGTACGGC ATGCGCGGAG CACCCGAAAT CCCGAGCCAG
CCCTTTGCCG AACGTGCCGA GGAACAGAAC GAAGCATCCG AGATCGCGCA GTTGGCCGAG
ACCTTGCGGA CCCGGCTGCT GGAGGATCGT ACTGGTGGTC CCTCCGATGG CTGGATGCTG
CTCGGCCAGA CCTATATGCG AATGAACCGC TTTGACGCGG CGGCAGAAGC CTTTGGCAGG
GTTGCGGAAC GTCCCGATGC CGATAGCGGT GTTCATTCCC AATACGCCGA AGCGCTTATC
TCTGCCGAGA ACGGGGTTGT GACGCAGACG GCGAGCCGCG CGATCGCGCA GGCCATGCAG
CTCGACCCGA TGAACCCGGC CGCTGTATAT TACCGTGCGC GTGAGCTGGC TCAGGACGGG
CTACTGCGCG ATGCACGGGC GTCGCTCTTG CTGCGGATTC AGGAAGCCCC GGGATTCGAA
CCTTGGATGG AGATCTTTCT CGAGACGGCG AACCAGTATG GTGAAGAAAT CGGGATCGAA
GAGCCCGTGC AGTTGCAGGA TTTCGCGCCA ATGTTCGCCG GGCGCTCACA GGCATCAACG
CCGGGACCCT CGCCCGAAGA TGTCGAGGCG GCAGAAGAGA TGTCCGGAGA GGATCGAGCG
GCTTTCATCC GGTCCATGGT CGACGGGCTG GCCGCACGGC TCGCAGAAGA GCCCGGCGAT
CTGGAAGGAT GGCTGCGGCT CGCGCGGGCT TACACGGTTC TTGGGAACAC CGAAGGTGCA
ACGGAAGCCG CGGACAAGGC GCGCGCTTTG GCAGAAATCC TGCCCTCTGA CGACCCTGGC
AGATTGGCGA CGCAGGCCGA GTTGAACGCA CTCGGTCTCT GA
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| Protein sequence | MIWVIGGVLA AISVLVLVLP AWRKRGEALG RDESAMEIFK DQLSEVDRDE ARNLISGDEA
TAARSEIKRR MLAITKRQGN TTKAKSASGG VTVLVVSALA IPVLGFVLYG MRGAPEIPSQ
PFAERAEEQN EASEIAQLAE TLRTRLLEDR TGGPSDGWML LGQTYMRMNR FDAAAEAFGR
VAERPDADSG VHSQYAEALI SAENGVVTQT ASRAIAQAMQ LDPMNPAAVY YRARELAQDG
LLRDARASLL LRIQEAPGFE PWMEIFLETA NQYGEEIGIE EPVQLQDFAP MFAGRSQAST
PGPSPEDVEA AEEMSGEDRA AFIRSMVDGL AARLAEEPGD LEGWLRLARA YTVLGNTEGA
TEAADKARAL AEILPSDDPG RLATQAELNA LGL
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