| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3402 |
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| Symbol | |
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| ID | 5712460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3579372 |
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| End bp | 3580727 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641269331 |
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| Product | neutral zinc metallopeptidase |
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| Protein accession | YP_001534736 |
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| Protein GI | 159045942 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCACGA TTTGCCAATC CATGAACCCC AACAGGGATC GGTTCGATTA CCACGAAGCT
CCTTTTCCTT CTTTGTTTTC AGGCGACCGG ATCGCAGCCA ACCTTCCCAC ATTCACCGTT
GATCAGGTCG CCGACCAGCT CAAGAGCGGG TTTTTCAAAT CACGGGAAGC CTCCTGGGAC
GTGGAGCCCG GTGGGGAGGC TATCGACGTG GACATCTCGC GCCTGACGGA AAAGGGTCAG
TTTTACGCAG AACTTGCACT CGATGCATGG ACGATGACCA CGGGCATCGA ATTCAACATC
ACCGAGCTGG AAATCTTCGC CTTTGGCTTC ACCAGATCAG GGATCATTTT CGATGACACC
GACTCCGGAG CCTACGCTCA GCCGATCGTG AATTCCGAGA ACGAGATCTA CACTGCGCGG
ATCAATATCT CGCAGGACTG GATCCGGAAC GATGGGGAAA CGATAGACAA CTACTCGTTC
CAGACATTCA TCCACGAAAT TGGTCATGCC CTCGGGCTGG AACATGCGGG CAATTACAAC
GGTAACGCAA AATACAGCAC CGACGCGCTC TATACCAATG ACAGCTGGCA GATGTCGATC
ATGTCGTATT TCAGCCAGAC CGATAATGCG TCGATCGACG CAAGTTTCGC CTACGTGGTC
ACGCCAATGA TCGCGGATAT CACGGCGGTT CAGCAGTTGT ATGGCGTCGC GGGTGATTTG
CGACCTGGCA ATACGATCTA TGGCCAGCCG ACGACACAAG GTGGCAGCCT GATGTCCATG
GCCGACGGCT ACTATGAAGA CTTCGGCGAT ACCAGCAGAC CGATCACCTA TACCATCATC
GACGACGGCG GATTTGACGC AATCAATTTC AGTGATGTCA CTGCGGATCA GAATATCAAT
CTCAATGGGG GCGCGGTCAG CGATGTCAAC GGCCTTAAGG GCAACCTGGT GATTTTCTCC
ACGACCGTTA TCGAATACGT GGTTTCCGGC TCTGGCAACG ACACTCTGAC CGGCAACGGT
GCCAACAATC ATTTCTTTGC AGGCGATGGC AGGGATACGA TCTTCGGTGG TGACGGAGAC
GACATTCTGG AAGGGCAGGG TGGCATCGAC ATCCTCACGG GCGGGGCGGG GCGCGATGGA
TTCGTCTTGT CCGGGACGGG TTTCGACGGT CTTGATATCG TCACCGACTT TACCGATGGA
GAAGATCTTC TGTTCTTCGC GGCGGCGGAC AGCTTTTCCG ATATTTCGGT CAGTGAGCGC
GCAACTGGCA CGGTCGTGGG GTTCAACGGC GAATTTGCCA TCCTCCTCGG TGTATCGTCC
AATCAGATCT CCGCGGACGA TTTCGTCTTC GGATAA
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| Protein sequence | MCTICQSMNP NRDRFDYHEA PFPSLFSGDR IAANLPTFTV DQVADQLKSG FFKSREASWD
VEPGGEAIDV DISRLTEKGQ FYAELALDAW TMTTGIEFNI TELEIFAFGF TRSGIIFDDT
DSGAYAQPIV NSENEIYTAR INISQDWIRN DGETIDNYSF QTFIHEIGHA LGLEHAGNYN
GNAKYSTDAL YTNDSWQMSI MSYFSQTDNA SIDASFAYVV TPMIADITAV QQLYGVAGDL
RPGNTIYGQP TTQGGSLMSM ADGYYEDFGD TSRPITYTII DDGGFDAINF SDVTADQNIN
LNGGAVSDVN GLKGNLVIFS TTVIEYVVSG SGNDTLTGNG ANNHFFAGDG RDTIFGGDGD
DILEGQGGID ILTGGAGRDG FVLSGTGFDG LDIVTDFTDG EDLLFFAAAD SFSDISVSER
ATGTVVGFNG EFAILLGVSS NQISADDFVF G
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