Gene Dshi_3390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3390 
Symbol 
ID5712448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3568985 
End bp3569746 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content59% 
IMG OID641269319 
Productmetallophosphoesterase 
Protein accessionYP_001534724 
Protein GI159045930 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGGTCTC TCTTCCGACG CAAATCAGCT GCACCTGAAG TACTGCCCCC TCCGGTGCCC 
GAAGGTCTGA CCTATGTTGT GGGTGATATC CATGGTCGCC TTGATCTGCT CGAACATGCG
CTCGAGCTGA TCCAAGCCGA CCGCGGATCG GCAGCAGCTT CGCTGGTTTT TCTAGGGGAC
TACGTCGACC GCGGTCCGGA TAGTGCGGGT GTTCTCAACC GGCTCTTCAA GCTGCGGATC
GCCGATGTGG AGGTTATCTG TCTGATGGGT AACCATGAGC GGATGATGTT GGATTTTCTA
GATGACCCGG ATCGCAGGGG GGATCGCTGG CTCAGGAATG GTGGGACTGA GACACTAGCA
AGTTTTGCGC CCGCAAGGGC GGACCCGCGG AAGGGCCAGT CGCGGCTTGA GGCACTGCGC
GACAGTTTCC TCGACACGAT CGAGCCGGAG CTTCTCTATT GGATGCGGTC GTTGCCCCTG
TCGTGGCGCT CGGGGTCGTT GGGCTGTGTG CATGCCATTA CCGATCCTGC GCAAGCCTGG
GAGGCACAAG ACGAGGACAT ACTGCTCTGG GGGCGCCCCT CTCCCGCTCT CATACCCCGG
TCCGATGGGA TTTGGGTAGC ACATGGTCAT ACGATCGTTG ACCAAAGCGA GGCTGTCTGC
GGTCATATTG CACTGGATAC CGGTGCTTAT CGAACGGGTC GTCTATCTGT CCTGCGATGC
GATGATCGCG GGATTAAGTT TTTCAGCGCG ACTGCGCCCT AG
 
Protein sequence
MWSLFRRKSA APEVLPPPVP EGLTYVVGDI HGRLDLLEHA LELIQADRGS AAASLVFLGD 
YVDRGPDSAG VLNRLFKLRI ADVEVICLMG NHERMMLDFL DDPDRRGDRW LRNGGTETLA
SFAPARADPR KGQSRLEALR DSFLDTIEPE LLYWMRSLPL SWRSGSLGCV HAITDPAQAW
EAQDEDILLW GRPSPALIPR SDGIWVAHGH TIVDQSEAVC GHIALDTGAY RTGRLSVLRC
DDRGIKFFSA TAP