| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3381 |
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| Symbol | |
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| ID | 5712439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3554408 |
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| End bp | 3556192 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641269310 |
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| Product | hypothetical protein |
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| Protein accession | YP_001534715 |
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| Protein GI | 159045921 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGGAG CGGATTTCAG ACCATACAAG GTGATCTTTC CCATAATGAC CGCGCTGTTC
CTGACGCCCG CAACGGCCCA GGAACTGGTG ATATCGGCCC CGGAGGAGAT CGAGGACGCC
TTGCGTGCCT CGTCCTTGAC CCGTGTTGCT CTCGCAGAGG AGACCACGAC AAGCCAGGAT
ATCGTTGCCG CGGCAAAAGC GGACTACCGG CGATTTGTTT CCGCGCTTTA TGCCAAGGGT
TACTACTCCG CGACGGTGTC GATCGAGATC GATGGACGCG AGGTTTCTTC GCTTTCCCCG
TTCGAGACGC CCGCTCAGGT CGCCACGATT TCCGTCGCCG TGGATCCCGG CCCTCTGTTT
CGGTTCGGAC GTGCAGAGGT GACCCCTCTG GCCCCGGACA CCGAGCTTCC AGATGAGTTC
CAGACGGGGG AGCCAGCACT CAGCGGGCTT ATCAGCCAGG CCGCCCGGGC CGCGGTACAG
GGTTGGCGCG ACCAAGGGCA CGCGAAGGTT GCCGTTGCCG GGCAATCCGT GACCGCAAAT
CATGCCGACG CAGAACTGGA CGTGACCGTC ACCCTCGATA CCGGACCTCG GCTGACATTT
GGCAACCTCG AAATCACGGG GAACGAAGAT GTCCGCACCG AGAGAGTCGA GGCCATGATC
GGCTTCGAGC CCGGCATGCA GTTTTCCGAT GACAACCTCG ACACGATCCA ACGCCGCGTC
CAGAGAACCG GTGCTTTCCG TTTCGCCCTC GTGAAAGAAG CGGAGGTGGC AAACCCGGAC
GACACGATCG ACATCCTTGT GGAGGTACAA GAAGAGCAGA AGCGCCGCCT TGGCTTCGGC
GGGGAAATCG GCAGCAGCGA TGGTGTATCG CTGACGGCAT TCTGGTTTCA CCGAAACTTG
CTTGGCGGGG CGGAGCGCCT GCGCTTCGAT GTCGCCCTGT CACGGGAAAT CGAAGACAAT
GCAGAGCTGG AATACCTGGT CGGAACGTCA TTCGTAAAAC CGTCGGTTTT TGCACCGGAG
GGCGATTTCA GGACCTCCAT CAGCATCTCG CGTGAGGCGA GCGAGAGCTT CCGCGAAGAT
ATTTTCGAGT TCAATATCGG CTTCGACTAT CGGTTGACCG AAGACCTGTT CACCTATGGT
GGGTTGCGGC TGACAACCAC GCGGACCGAT CTCCGCCCGG AGAAACGCGA TTTCCTGATC
GTTGGCGCAC CCTTTGGCCT GGTCTATGAC AACCGAGAGA TCACCACGGA TGCTCGTGAG
GGTATCTACG CCAAAGCAGA ACTGTTCCCC TTCCTGGGGC AAAGAGATGC GGATGACGGA
GCCCGCCTGA CAGTGGACGC GCGATACTAT CGCAGTTTCG CCGAGGAATC TCTAACCCTT
GCTGCACGCG GGCAACTCGG CAGCGTGTTC AACGCGCGCT CTGGTGCGGT GCCGGAATCG
TTCCTGTTCC TCTCCGGGGG GGGTGGAACA GTCCGCGGAC AACCGTTCGA GTCTCTCGGG
GTGGACCGCA ACGGAACCGT CGGCAGCGGC GAAGGCTTTG CCGGCCTGTC GCTGGAAGCC
CGTTACAGGC TTACTGACAC GATCGGCGCC GTTGGTTTCT TCGACTACGG CTTCATCACC
GAGGGCGATG TCTTCACAGG ATCGGGCAAA AGCCATAGCG GTGCGGGGCT CGGATTGCGC
TATGATACGC CGGTCGGGCC GATCCGGCTG GACATCGCCG CACCTGTGGG TGGCGATACC
GATGACGGTG TGCAGTTCTA TTTCGGGTTG GGACAATCCT TTTGA
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| Protein sequence | MLGADFRPYK VIFPIMTALF LTPATAQELV ISAPEEIEDA LRASSLTRVA LAEETTTSQD
IVAAAKADYR RFVSALYAKG YYSATVSIEI DGREVSSLSP FETPAQVATI SVAVDPGPLF
RFGRAEVTPL APDTELPDEF QTGEPALSGL ISQAARAAVQ GWRDQGHAKV AVAGQSVTAN
HADAELDVTV TLDTGPRLTF GNLEITGNED VRTERVEAMI GFEPGMQFSD DNLDTIQRRV
QRTGAFRFAL VKEAEVANPD DTIDILVEVQ EEQKRRLGFG GEIGSSDGVS LTAFWFHRNL
LGGAERLRFD VALSREIEDN AELEYLVGTS FVKPSVFAPE GDFRTSISIS REASESFRED
IFEFNIGFDY RLTEDLFTYG GLRLTTTRTD LRPEKRDFLI VGAPFGLVYD NREITTDARE
GIYAKAELFP FLGQRDADDG ARLTVDARYY RSFAEESLTL AARGQLGSVF NARSGAVPES
FLFLSGGGGT VRGQPFESLG VDRNGTVGSG EGFAGLSLEA RYRLTDTIGA VGFFDYGFIT
EGDVFTGSGK SHSGAGLGLR YDTPVGPIRL DIAAPVGGDT DDGVQFYFGL GQSF
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