Gene Dshi_3380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3380 
SymbolmotB 
ID5712438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3553404 
End bp3554222 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content57% 
IMG OID641269309 
Productchemotaxis protein MotB 
Protein accessionYP_001534714 
Protein GI159045920 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGGGG ATACTCCCGC ACCGGTCATC ATCAAGCGAA AAAAAGTTGT TGCCGGCGGC 
GGTCACCATG GTGGTGCATG GAAAGTCGCC TATGCGGACT TCGTGACCGC GATGATGGCT
TTTTTCATGC TGATGTGGCT GTTGAATGCG ACGACCGAAA AGCAACGCAA GGGGATTGCG
GACTATTTCA ATCCGACAAT CCCGGTCAAC CGCATTTCCG GTGGTGGCGA AGGTATGTTC
GGAGGTGACA ACATCTTTTC CGACGTCTCC TTGGCCCGCA GCGGAACCGG CGGGTCCGAA
AACTCGTCCA GATCCAGTCA GCTCGAAGCC CTCAGGGCCG CAGAAGAAGC GCGGATGCAG
GCGCTGTCCG AAGATCTGCT GGGTTTATCG GGTGAAAGCG ATGTGGCCGA GCAACTGCGC
CGGCATGTCA GCACGCGTGT GACGGATCGT GGCCTTGTGG TAGATCTTTT CGATCAGGGC
GAGGCGACGG TCTTCGTACC CGGATCAACC GAACTGACCC TCTTGGGCAA AGCCCTTCTG
AAGGTGATCC ATGAGGTGTT TTCCGTTGTC GACAACCCTC TGTCCATCAC CGGGCATGTG
CCGAGTCAGC CGGTCGTTCT GCGCGAACGG GATGCATGGG AGGTCTCGAC ATCTCGGGCC
CATGTGGCGC GCAGCACCCT CGAGTCCTAT GGGTTTGCCG AAAGCCGGAT CATGAAAGTG
GCCGGGCAGG CGGATCGCAA GCCAGCTGCC TATCCAGATA TATCAAGCAA AAACAACAGA
TTGGAAATTG TTCTCCTGCG AAATGGGATC TCCGGATAA
 
Protein sequence
MGGDTPAPVI IKRKKVVAGG GHHGGAWKVA YADFVTAMMA FFMLMWLLNA TTEKQRKGIA 
DYFNPTIPVN RISGGGEGMF GGDNIFSDVS LARSGTGGSE NSSRSSQLEA LRAAEEARMQ
ALSEDLLGLS GESDVAEQLR RHVSTRVTDR GLVVDLFDQG EATVFVPGST ELTLLGKALL
KVIHEVFSVV DNPLSITGHV PSQPVVLRER DAWEVSTSRA HVARSTLESY GFAESRIMKV
AGQADRKPAA YPDISSKNNR LEIVLLRNGI SG