Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3373 |
Symbol | dnaA |
ID | 5712431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 3544704 |
End bp | 3546086 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641269302 |
Product | chromosomal replication initiation protein |
Protein accession | YP_001534707 |
Protein GI | 159045913 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGAAG ACACTTGGGG GAGTGTTCAA AATGATCTGC TTAAAACCGT CGGGCAAAAC AACTATCTTA CTTGGATCGA GCCTCTGAAG TTTGCGGATT GCAGAGGTGG CGTTGTACGA TTTGAAGCAC CCAGCAGCTT TGTTGGGAAC TGGGTGGCGC GCAACTATCG TGAGGACATT TTGCATCATC TCGTCTCTGC GGGAGTCGAG GTGAAGCGGA TCGAATTCGA TGTGGCGAAG CTTGCACAGG CCGCACGTCA GGTGCGGCCC AAGGGCACCG AGCGCACCAT GACCCCATCG CCAGGGGACG TGGCCATGGA CAAGCCCGTA CCGTCGGCTT CACTACAGAG CGCGCCACTG GATCCGCGTT TGACCTTCAG CAACTTTGTG GTCGGAAAAC CGAACGAGCT CGCGCACGCC TCGGCCCGTC GTGTTGCCGA GGGCGGGCCG GTCTCGTTCA ACCCGCTGTT CCTCTATGGC GGGGTCGGTC TGGGCAAGAC GCACCTGATG CATGCGATTG CCTGGGAAGC GCAAGCGCGC AACCCAGGGT TGAAAGTCCT GTATTTGTCG GCCGAGCAGT TCATGTACCG GTTCGTGCGT GCCCTGCGGG ATCGTAACAC CATGGAGTTC AAGGAACTGT TCCGGTCCGT GGACCTGTTG ATGGTGGATG ACGTGCAGTT CATCGCCGGT AAGGACAGCA CTCAGGACGA GTTCTTCCAC ACGTTCAATG CTTTGGTCGA CCAGAACAAG CAGATAATCA TCTCGGCGGA TCGCGCGCCG GGAGAGATCG ATGGTCTCGA AGATCGGATC AAGTCGCGGC TGTCTTGTGG TCTGGTGGTC GACATCCATC CAACAGACTA CGAATTGCGA CTGGGCGTTC TCCAGCAACG TCTGCAGGAC CAGATTGCGG CTGGCGAGAC CATCGCGGTG GAGGATGGCG TTCTGGAATG CCTCGCCCAG CGCATTTCAA CGAACGTCCG CGTACTCGAG GGTGCGCTCA ACAGGTTGAT CGCGTTTTCG GACCTTGTTG GCCGCCGGAT CACGCTCGAC CTTGCGCATG AAGCCCTGTC GGACCTGATC AGAGCCCACG ACAAGAAGGT AACGGTGGAC GAGATCATGC AGGCGGTAGC GAAGTACTAC AATCTGCGCA TGACCGATCT TCTGGGCCCC CGCCGGACCC GTACGATTGC CCGCCCGCGG CAACTAGCGA TGTATCTGGC CAAGACGCTG ACAACCCGGT CCCTGCCCGA GATCGGGCGA CGGTTCGGGG GGCGCGACCA CACCACGGTC ATTCATGCGG TCAAGCGCAT CGAAGCCCTG TGCGACAGTG ACCCCCAGAT TTCCGAAGAT GTCCGGTCGC TTTTGCGCAC GTTGGAAAAC TGA
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Protein sequence | MTEDTWGSVQ NDLLKTVGQN NYLTWIEPLK FADCRGGVVR FEAPSSFVGN WVARNYREDI LHHLVSAGVE VKRIEFDVAK LAQAARQVRP KGTERTMTPS PGDVAMDKPV PSASLQSAPL DPRLTFSNFV VGKPNELAHA SARRVAEGGP VSFNPLFLYG GVGLGKTHLM HAIAWEAQAR NPGLKVLYLS AEQFMYRFVR ALRDRNTMEF KELFRSVDLL MVDDVQFIAG KDSTQDEFFH TFNALVDQNK QIIISADRAP GEIDGLEDRI KSRLSCGLVV DIHPTDYELR LGVLQQRLQD QIAAGETIAV EDGVLECLAQ RISTNVRVLE GALNRLIAFS DLVGRRITLD LAHEALSDLI RAHDKKVTVD EIMQAVAKYY NLRMTDLLGP RRTRTIARPR QLAMYLAKTL TTRSLPEIGR RFGGRDHTTV IHAVKRIEAL CDSDPQISED VRSLLRTLEN
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