Gene Dshi_3366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3366 
Symbol 
ID5712424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3538823 
End bp3539614 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content62% 
IMG OID641269295 
Productputative aminoglycoside phosphotransferase 
Protein accessionYP_001534700 
Protein GI159045906 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCACGGGG GCCGAACCAG CCGGGTCTGG AAAGTAGTAT CTGCTGCCAG GACCCCTCTG 
ATCGCAAAGC TGTCGCGCCA GATCGACAGC ACGGAAATGT TTCCCAACGC CCCGGATCAG
GAATGGCGCG CTCTGATCAA GCTGTGCGCC AATGGTGTTG CGCCCGCACC CGTTGCTTTT
GCAAGTAACG GTGCAGTGGG TTCTGTCCTT CTGTTGCATG CCGCCGACCG GGATGCCGCT
CCGGATGCAA GCAATCTCGC AAGGCTGCTT CTGCGGATCC ACCGGATAGA GCCATGGGAC
GATCTTCCCA GGCTCCCGAT GACACCCGAT GCCATCTTGC AAGATGGGAA CGCCATGCTC
AGACAGGCGG GGGCAACGGC ATGGCTGTCA GGGATGCGCC CCAAACCTCC CCTGTTGCCA
ATAACGCTTG ATGCAAGGTT AATTCACAGA GACCTTGTAC CTGCCAATAC GGCCGTCGTG
GATGGTCGAC ATGTCGCCAT TGACTGGCAA TGCCCTTCGA TTGGCGACCC GGCCGAAGAC
CTGGCCCATG CCAGTTCTCC GGCCATGCAG TCGTTGGCGA AGGGGGTACC GCGCATTGCC
GCCCGGGACC TTGTCGCCGC TTACCCCGAC CGCGATGTCC GTGCCCGCTT CCGACAAATG
GAGCCCCTCT ATCGGTGGCG GATGGCCTGC TATTGCCACC TGCAGGCAAG CCGCGGGGCG
GCGGCCTACG AACAAGCTGT AACACTGGAG TGTGAGGCCT TAGAGCAGGC TTGCCGCCAA
GCCCACCGCT GA
 
Protein sequence
MHGGRTSRVW KVVSAARTPL IAKLSRQIDS TEMFPNAPDQ EWRALIKLCA NGVAPAPVAF 
ASNGAVGSVL LLHAADRDAA PDASNLARLL LRIHRIEPWD DLPRLPMTPD AILQDGNAML
RQAGATAWLS GMRPKPPLLP ITLDARLIHR DLVPANTAVV DGRHVAIDWQ CPSIGDPAED
LAHASSPAMQ SLAKGVPRIA ARDLVAAYPD RDVRARFRQM EPLYRWRMAC YCHLQASRGA
AAYEQAVTLE CEALEQACRQ AHR