Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3366 |
Symbol | |
ID | 5712424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 3538823 |
End bp | 3539614 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641269295 |
Product | putative aminoglycoside phosphotransferase |
Protein accession | YP_001534700 |
Protein GI | 159045906 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCACGGGG GCCGAACCAG CCGGGTCTGG AAAGTAGTAT CTGCTGCCAG GACCCCTCTG ATCGCAAAGC TGTCGCGCCA GATCGACAGC ACGGAAATGT TTCCCAACGC CCCGGATCAG GAATGGCGCG CTCTGATCAA GCTGTGCGCC AATGGTGTTG CGCCCGCACC CGTTGCTTTT GCAAGTAACG GTGCAGTGGG TTCTGTCCTT CTGTTGCATG CCGCCGACCG GGATGCCGCT CCGGATGCAA GCAATCTCGC AAGGCTGCTT CTGCGGATCC ACCGGATAGA GCCATGGGAC GATCTTCCCA GGCTCCCGAT GACACCCGAT GCCATCTTGC AAGATGGGAA CGCCATGCTC AGACAGGCGG GGGCAACGGC ATGGCTGTCA GGGATGCGCC CCAAACCTCC CCTGTTGCCA ATAACGCTTG ATGCAAGGTT AATTCACAGA GACCTTGTAC CTGCCAATAC GGCCGTCGTG GATGGTCGAC ATGTCGCCAT TGACTGGCAA TGCCCTTCGA TTGGCGACCC GGCCGAAGAC CTGGCCCATG CCAGTTCTCC GGCCATGCAG TCGTTGGCGA AGGGGGTACC GCGCATTGCC GCCCGGGACC TTGTCGCCGC TTACCCCGAC CGCGATGTCC GTGCCCGCTT CCGACAAATG GAGCCCCTCT ATCGGTGGCG GATGGCCTGC TATTGCCACC TGCAGGCAAG CCGCGGGGCG GCGGCCTACG AACAAGCTGT AACACTGGAG TGTGAGGCCT TAGAGCAGGC TTGCCGCCAA GCCCACCGCT GA
|
Protein sequence | MHGGRTSRVW KVVSAARTPL IAKLSRQIDS TEMFPNAPDQ EWRALIKLCA NGVAPAPVAF ASNGAVGSVL LLHAADRDAA PDASNLARLL LRIHRIEPWD DLPRLPMTPD AILQDGNAML RQAGATAWLS GMRPKPPLLP ITLDARLIHR DLVPANTAVV DGRHVAIDWQ CPSIGDPAED LAHASSPAMQ SLAKGVPRIA ARDLVAAYPD RDVRARFRQM EPLYRWRMAC YCHLQASRGA AAYEQAVTLE CEALEQACRQ AHR
|
| |