Gene Dshi_3358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3358 
Symbol 
ID5712416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3531547 
End bp3532338 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content54% 
IMG OID641269287 
Productprotein of unknown function DUF1217 
Protein accessionYP_001534692 
Protein GI159045898 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTCC AGCCAATCAT ACCCACCGGT GGTCTGGCGG GCTGGACCTT TCTCAACCGA 
ACTCTCGAGG CACAGAAGGA GGCGTTCGGC CAATCGACGC AGTATCGTCG GGAGGAGGAT
TACTTCCGCG CAAACATTGG CAACATCGAA ACTGCGGAAC AACTCGTGGC AGATCGGCGA
CTTCTGGCAT TTTCTCTGTC GGCGTTCGGT CTGGACGCTG ATCTTCCCAA CAAGTTCTTC
ATCCAGAAGA TTCTGTCGGA CGGGACATCC GACAATGCCG CCTTATCCAA TCGTTTGTCG
GACAAGACCT ATCGCGAGTT TTCGGATGCC TTCGGGCTCG GTCAGGGGCA GGTGCGCAAG
ACGCAGCAGA CCAGCTTTGC CGATGAGATC ATCCAGAAGT ACGAGACTCA GAAATTCGAA
GAATCCGTGG GCAATGTGAA CGATGACCTC CGCCTAGCCC TGAACTTGAA ACGCGAAATT
TCTGACCTTG CGTCGAGCGA TATGTCCGAA CGGGCAAAGC TTTTCACGGT GTTGGGAAGC
CCGCCCCTGC GCACAACCTT CGAAACGGCT TTTAGGCTGC CAAGCGCCTT CGCTGGCCTC
GATATCGATC GTCAGGTTAC TGTTCTCGAA GAGAAACTGG AGTCTGCTTT CGGGGATGCG
TCAATTTCTC AGTTCAAGGA TCCCGACTTG TCGGAGCGCT TGATTCAGAA ATTCCTGCTT
CAATCAGAAC TGAGCAGTTT CGAGGCAACC TCTTCCCCTG CCGCGACCGC ACTTTTCTTG
CTGCGGTCTT GA
 
Protein sequence
MSFQPIIPTG GLAGWTFLNR TLEAQKEAFG QSTQYRREED YFRANIGNIE TAEQLVADRR 
LLAFSLSAFG LDADLPNKFF IQKILSDGTS DNAALSNRLS DKTYREFSDA FGLGQGQVRK
TQQTSFADEI IQKYETQKFE ESVGNVNDDL RLALNLKREI SDLASSDMSE RAKLFTVLGS
PPLRTTFETA FRLPSAFAGL DIDRQVTVLE EKLESAFGDA SISQFKDPDL SERLIQKFLL
QSELSSFEAT SSPAATALFL LRS