| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3343 |
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| Symbol | |
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| ID | 5712401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3509480 |
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| End bp | 3510721 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641269272 |
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| Product | aminotransferase class-III |
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| Protein accession | YP_001534677 |
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| Protein GI | 159045883 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.65062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATC TGCTGAAGCG GCGCGCGCGC CTGATGGGGC CGAATGTGCC GACCTTCTAC
GACCCGCCCT TGCATATCGT GCGGGGTGAA GGCGTCTGGC TCTGGGACGC AGGGGGGCGT
CGGTACCTCG ATTGTTACAA CAACGTGCCC CATGTGGGGC ATTGTCATCC CCGAGTGGTC
GACGCGATCG CCCGGCAGGC CCGGGTGCTC AACACCCATA CGCGGTACCT GCACGAGGGG
GTGCTCGACT ATATCGAACG GCTGACCGGG ACCATGGACA ACGGGCTCGA TCAGGCGCTG
CTGGTCTGCA CCGGGTCCGA AGCGGTGGAT GTGGCGCTGC GGATGGCGCG CGCGGCCACG
GGCAAAACCG GGTTGATTGC CACCGACAAC ACCTATCACG GCAACACCAC TGCCGTGGCG
CAGCTGAGCA CCCGGCGCCC GCCCATCGGG GGCTATTCGG ACCATGTGCG ATTGGTGCCC
GCGCCGGAGC CGGGCACCGA TGGCGCGGCC TTCGGGGCCC ATGTCGCGCG GGCTGCCGCC
GAGTTGGAGA CCGCCGGGCA TGGGGTTGCC GCCCTGATCG TTTGCCCGAT CTTTGCAAAC
GAGGGGCTAC CCTGTCTGCC GCGCGGGTTT CTCGAACCGG CGGTAGCGGC ACTGCGGACC
CGTGGCGGGC TGCTGATTTC CGACGAGGTG CAGCCGGGCT TCGGGCGGCT GGGCGATGTG
TTCTGGGGGT ATCAGGCGCT GGGCATCGCG CCGGATGTTG TGACATTGGG CAAATCCATG
GGCAATGGCT ACCCGGTTGC GGGGGTGGTG GCGCGGACAG AGATCATGGG CGCGTTTCGG
GAGGCATTCG GCTATTTCAA TACCTTCGGC GGCTCGCCCG TCGCGGCCGC GGCGGCCATG
GCGGTGCTGG ATGTGCTGGA AGACGAAGGG CTGGTCGAGA ACGCGAAACG GGTCGGGCGA
TACACGCTTG AAAGGCTCCA GGCGCTGCGC CACCCGGCGA TTGACGGTGT CCGGGGATAC
GGGCTGGCCT TCGCCTTGGA TCTTGTCGAT ACAGACGGGG CTCCCAACAC GGCCCTCGCG
GCGGCCGTGA CTGAAGAAGC CAAGCGGCGC AGCGTTTTGA TCAACCGGAT CGGGCGCGAC
ATGCATATCC TGAAAATCCG CCCGCCCCTG CCCTTTGCGC CAGAGCATGG CGACCGGCTG
GGCGACGTGT TGCAAGCGGC GTTCGACGCA TGCCCGCGCT GA
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| Protein sequence | MSDLLKRRAR LMGPNVPTFY DPPLHIVRGE GVWLWDAGGR RYLDCYNNVP HVGHCHPRVV
DAIARQARVL NTHTRYLHEG VLDYIERLTG TMDNGLDQAL LVCTGSEAVD VALRMARAAT
GKTGLIATDN TYHGNTTAVA QLSTRRPPIG GYSDHVRLVP APEPGTDGAA FGAHVARAAA
ELETAGHGVA ALIVCPIFAN EGLPCLPRGF LEPAVAALRT RGGLLISDEV QPGFGRLGDV
FWGYQALGIA PDVVTLGKSM GNGYPVAGVV ARTEIMGAFR EAFGYFNTFG GSPVAAAAAM
AVLDVLEDEG LVENAKRVGR YTLERLQALR HPAIDGVRGY GLAFALDLVD TDGAPNTALA
AAVTEEAKRR SVLINRIGRD MHILKIRPPL PFAPEHGDRL GDVLQAAFDA CPR
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