Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3342 |
Symbol | |
ID | 5712400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 3509061 |
End bp | 3509483 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641269271 |
Product | peptidyl-tRNA hydrolase domain protein |
Protein accession | YP_001534676 |
Protein GI | 159045882 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1186] Protein chain release factor B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAGGA TCAGCGATAC GATAACCTTG GAGGACTGGG AGATGTCCGA AAGCTTCATG CGGGCTTCGG GCCCGGGCGG GCAGAACGTG AACAAGGTGT CCTCCGCGGT CGAGTTGCGC TTCGAAGCCG CGCGGAGCCC CAACCTGCCC GACCCGGTGA AAGGACGATT GCGACGGCTG GCCGGGCGGC GCTGGACCAA GGATGGGGCC GTGGTGCTGC AGGTGGACGA GACCCGCAGC CAGGTGCGTA ACCGCGAGAT TGCCCGGGAC CGGCTGGCGG AGTTGATCCG GGAGGCCCTG AAGCGACCTG TACGGCGGAT CCCGACCAAG CCCACGCTCG GCTCGAAACG GCGACGGCTG GCGGCCAAGA CCCAGCGCGG GCAGGTCAAG GCCCTGCGCG GCAAGGTACA GGACGGCGAA TGA
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Protein sequence | MLRISDTITL EDWEMSESFM RASGPGGQNV NKVSSAVELR FEAARSPNLP DPVKGRLRRL AGRRWTKDGA VVLQVDETRS QVRNREIARD RLAELIREAL KRPVRRIPTK PTLGSKRRRL AAKTQRGQVK ALRGKVQDGE
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