| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3336 |
|---|
| Symbol | |
|---|
| ID | 5712394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 3502874 |
|---|
| End bp | 3503410 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641269265 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001534670 |
|---|
| Protein GI | 159045876 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACCCGA TCTTCCGTTT CCTGTTCCAG AGTTGGCGCG CCTCGAACCT GCCGCCGCTG
GAGCCGCTGG GCACCCATGT CAGCCACCAT GTCTGCTGGC CCTGGGACCT GGACCTGTTT
CTGGAGCTGA ACAACGGGCG GACCCTGACC CTGTTCGATC TGGGCCGCAT CCCGCTGGGG
CAGCGCGCGG GGCTGCTGGC GCTATTGAAA CGCGAGCGCT GGGGGTTGAC CGTGGCGGGG
TCGGTCGTGC GGTATCGGCG GCGGGTCCGG ATGTTCGACC GGATCGAGAT GCGTTCCCGG
CTGATCGGGT GGGACGCGCG GTTCACCTAT ATCGAGCAGA TCATGCTGGT CCGGGGCGTG
GTGACGAGCC AGGCGGTGTT CCGCACTGCG GTGACCGACG CCAAGGGGAT CGTGCCGACG
CAAAGGTTGA TCGACGCGCT GGCGCCCGGG TTGGCCACGC CGGATCTGCC GGACTGGGTG
CAGGCCTGGA TCGCGGCAGA AGACCTGCGC CCCTGGCCTC CGGCGCTGGC GGGCTGA
|
|---|
| Protein sequence | MYPIFRFLFQ SWRASNLPPL EPLGTHVSHH VCWPWDLDLF LELNNGRTLT LFDLGRIPLG
QRAGLLALLK RERWGLTVAG SVVRYRRRVR MFDRIEMRSR LIGWDARFTY IEQIMLVRGV
VTSQAVFRTA VTDAKGIVPT QRLIDALAPG LATPDLPDWV QAWIAAEDLR PWPPALAG
|
|---|
| |