| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3334 |
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| Symbol | recQ |
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| ID | 5712392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3500340 |
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| End bp | 3502379 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641269263 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_001534668 |
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| Protein GI | 159045874 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.729539 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCCG CCGACACGAT CCTGTCGTCA GTCTTCGGAT TCTCCGAATT CCGCCCCGGC
CAGGAAGAAG TGGTCGATGC CGTTTGCGCG GGCGAAGACG TGTTGGCGAT CATGCCCACG
GGCGGCGGCA AATCGCTCTG CTTCCAGTTG CCTGCGCTGG CCCGCGAGGG GCTGACCGTG
GTGATCTCGC CTCTGATCGC CCTGATGCGC GACCAGGTAA GGGGGTTGCG CGAGGCGGGC
GTGGCCGCGG GGGCACTGAC CTCCGGCAAC ACGCCCGAAG AGACCGACGC GGTGTTCGAA
GCCCTCGAAG ACGGGTCGCT GAAAATCCTC TACATGGCGC CCGAACGCCT CGCCCATGGC
GGCACGGTCC GCCTGTTGTC CCGCGCCGGG GTCGGCCTCC TGGCGGTGGA CGAGGCGCAC
TGCGTCAGCC AATGGGGCCA TGACTTCCGC CCCGACTACC TGCGCATCGG CGATCTGCGC
CGGGCGCTCG ACGTGCCGGT GGCCGCCTTT ACCGCCACCG CCGATGCCGA AACCCGTGAC
GAGATCATCG CGCGCCTCTT CCCCGACACG GCCCCGCGCG TGTTCCTGCG CGGGTTCGAC
CGCCCGAACA TCCACCTCGC CTTCGCAGCC AAGGACAGCC CCCGGCGGCA GATCCTCGAC
TTCGCCGGGG CCCGCAAGGG TCAGTCCGGC ATCGTCTATT GCGGCACCCG CGCCAAGACC
GAGGGCCTCG CCCAGGCCCT CCGCGAGGCC GGGCACATGG CCTGCCACTA CCACGGCGGG
ATGGAGGCCG AGGACCGCCG CATCGTCGAG ACCCGGTTTC AACGCGAGGA CAGTCTCATT
GTCGTGGCCA CCGTGGCCTT CGGCATGGGC GTCGACAAAC CCGATATCCG CTGGGTCGCC
CACGCGGACC TGCCCAAGAG CATCGAGGCC TACTACCAGG AGATCGGCCG CGCGGGCCGC
GACGGGGCGC CGGCCGAGAC CCTGACGCTC TTCGGCCCCG ACGACATCCG TCTGCGCCGC
AGCCAGATCG ACGAAGGCCT CGCCCCGCCC GAGCGCAAAG GTGCCGATCA CGGCCGTCTC
AACGCGCTGC TGGGTCTGGC CGAGGCGCTG CGCTGCCGCC GCCAGGTCCT GCTGTCCTAT
TTCGGTGAGG ACAGCGCAGC ATGCGGAAAC TGCGATCTCT GCGACACCGC GCCCGAGGTG
TTCGACGGCA CCGATGCGGT GCGCAAGGCA CTCTCGGCGG TGCTGCGTAC GGGGGAAAGC
TTCGGCGCGG GGCATCTCAT CGACATCCTG ACCGGGAACG CCACCGACAA GGTCCGCCAG
CGCGGGCACG AAGACCTGCC AACCTTCGGC GTGGGCCGCG ATCTGGATAA ACGCACCTGG
CAGGGTGTGT TCCGGCAAAT GATGGGCCAT GACCTCTTGC GCCCCGATGC TGCCCGCCAC
GGCGCGCTGG TGATGACCGA CGCGGCCCGC CCGCTCCTGC GCGGGGAAAC CACGATCGAG
TTGCGCCGTG ACACCCTGCG CAAGGCCGCC CACCGCCCCG CCGTCCGTGC GCTGGTCTCG
GACGAGGACG CGCCGCTCCT GTCGGCGCTC AAGGCCAAGC GCCGCGCCCT GGCCGAGGCC
GCCGGGGTCC CCGCCTACGT GATCTTCACC GACCGCAGTC TGATCGAGAT GGCCGAACGG
CGCCCCGACA CCCTCGATGC CTTCGCGGGT ATCAGCGGCG TGGGGGCCAA GAAGCTGGAA
AAATACGGCG CGGCCTTTCT CGAAGTCATC GCGGGCGACC GACCGACCCC GGCCCATCCC
GCGCGCCGCA AGCTGGCCGG GCGTGCGGCC GGCAGCACCT ATGACCGCCT GCTCGAAGCC
CAGGCCGCCC TGCTGCGCGG TGCGGCAGGC ACGGACAAGC CGCTCAGCTG TTCCGCGGCC
ATCCTGTCGC GGGTGGCCGA GACCCGGCCG CGGGATGAGG ATGATATGGT CCGCATCCTG
GGCGACCGTC GCGCGGAACG GTTCGGCGCG GCCTTTCTCG AGGTGCTGCG CGAGGCGTGA
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| Protein sequence | MPSADTILSS VFGFSEFRPG QEEVVDAVCA GEDVLAIMPT GGGKSLCFQL PALAREGLTV
VISPLIALMR DQVRGLREAG VAAGALTSGN TPEETDAVFE ALEDGSLKIL YMAPERLAHG
GTVRLLSRAG VGLLAVDEAH CVSQWGHDFR PDYLRIGDLR RALDVPVAAF TATADAETRD
EIIARLFPDT APRVFLRGFD RPNIHLAFAA KDSPRRQILD FAGARKGQSG IVYCGTRAKT
EGLAQALREA GHMACHYHGG MEAEDRRIVE TRFQREDSLI VVATVAFGMG VDKPDIRWVA
HADLPKSIEA YYQEIGRAGR DGAPAETLTL FGPDDIRLRR SQIDEGLAPP ERKGADHGRL
NALLGLAEAL RCRRQVLLSY FGEDSAACGN CDLCDTAPEV FDGTDAVRKA LSAVLRTGES
FGAGHLIDIL TGNATDKVRQ RGHEDLPTFG VGRDLDKRTW QGVFRQMMGH DLLRPDAARH
GALVMTDAAR PLLRGETTIE LRRDTLRKAA HRPAVRALVS DEDAPLLSAL KAKRRALAEA
AGVPAYVIFT DRSLIEMAER RPDTLDAFAG ISGVGAKKLE KYGAAFLEVI AGDRPTPAHP
ARRKLAGRAA GSTYDRLLEA QAALLRGAAG TDKPLSCSAA ILSRVAETRP RDEDDMVRIL
GDRRAERFGA AFLEVLREA
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