Gene Dshi_3333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3333 
Symbol 
ID5712391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3499478 
End bp3500281 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content67% 
IMG OID641269262 
Producthypothetical protein 
Protein accessionYP_001534667 
Protein GI159045873 
COG category[S] Function unknown 
COG ID[COG3022] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCG TGATTTCCCC GGCCAAACGT CTTGATTGGG ATGTGGCGAC GCCCGCGGGC 
GCGACCCTGC CGGAATTCCA GGACGAGGCA ATGGCTTTGG TGGATGTCGC GCGGGAGCTC
GACGTGGCCG ATCTGCGCAA GCTCATGGGC CTGTCCGAGA AGCTCGCGGT GTTGAATCTC
GACCGCTTCG CCAGTTTCGC TGAACAGGCC GACACCGAGA CCGCCCGCCC CGCCGCGCTC
GCCTTCGCGG GTGACACTTA CACGGGGCTG GAGGCGCGGA GCCTTTCGGA CGACGAGATG
GCGTACGCCC AGGATCACCT GCGCATCCTG TCCGGTCTCT ACGGCGTGCT GCGTCCGCTC
GACCTGATCC AGGCCTACCG GCTCGAAATG GGCAGCCGCC TCGCGACGCC ACGGGGCAAG
ACGCTTTATG ACTGGTGGGG CGACCGGATC GCGACGGCGC TCAACCGTGC CGCTGAGGCG
ACCGACGGTC GCCTTCTCGT GAACTGCGCC TCGCAGGAGT ATTTCGGCGC GGTGGACCTC
AGCGCACTCT CCGTTCCCGT GGTCACGCCC GTTTTCCTCG AAGACCGCGA CGGTACGACC
AAGACTGTCA GCTTCTTTGC CAAGAAAGCC CGCGGCGCCA TGGCCCGCTT CATCGTTCAG
AACCGGGTGC GCAACCTCGA TGGGCTGCGC GATTTCGAGA CCGGCGGCTA CCGCTTCGTC
CCGGATCAGA GCACCGAAAC CGCGCCGGTT TTCGTCCGCC CCTATCCCGA GGCCGCCCCG
GCTGCGCGCG AACTCGCCTC CTAG
 
Protein sequence
MLTVISPAKR LDWDVATPAG ATLPEFQDEA MALVDVAREL DVADLRKLMG LSEKLAVLNL 
DRFASFAEQA DTETARPAAL AFAGDTYTGL EARSLSDDEM AYAQDHLRIL SGLYGVLRPL
DLIQAYRLEM GSRLATPRGK TLYDWWGDRI ATALNRAAEA TDGRLLVNCA SQEYFGAVDL
SALSVPVVTP VFLEDRDGTT KTVSFFAKKA RGAMARFIVQ NRVRNLDGLR DFETGGYRFV
PDQSTETAPV FVRPYPEAAP AARELAS