Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3332 |
Symbol | |
ID | 5712390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 3497022 |
End bp | 3499481 |
Gene Length | 2460 bp |
Protein Length | 819 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641269261 |
Product | sensor histidine kinase/response regulator |
Protein accession | YP_001534666 |
Protein GI | 159045872 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAGCG CTGAAATCGA GAGCAAGCTC GCCGCCGAAC GGCGCGCAAG ACTGACCGCG GAGCGCCTGC TCGCCCAAAA ACAAGAAGAG CTTTACGCCG CGAATCAAAA GCTCTCCCGG CATGCATTCA CCCTATCCGA CCAGATCGTC GAGCAGCGCC ACGCCGCCGA AGAGCTGAAG GACGAGAATT TCCAGGTCAG ATCGGACCTG CGGCGGGCGG AACAGCGGCT GTGGACCTCG TTCGAGACGA TAGAGGATGG CTTCGCGGTG TTCGATGCCT CGCGGAGGCT GGTCCTCGCC AACCCGGCCT ATGTGTCCAT CTTCGACGGG CTGGAGGATG TGGCGCCGGG CATCGGCTAT GCAGAACTCC TGCGGCTCTG CGCCGAGGAG GGGATCATAG ATACCGAAGG GCTGAGTCGT CAGGACTGGT GCGCGCAGAT GGAGATGCGC TGGAACGGAG CGCAGATCGA GCCTGCGGTG GTGCGGCTCT GGAACGGGTT TTCCATCAAG CTGGTGGAGC GGCGCGGCGA GGACGGCGAC ATCGTCAGCC TGTGCCTGAA CATCACCGAT ACCATCAAGC GCGAGCAGGA ACTGACCCTC GCACGGACCC GGGCCGAGGC CGCCAATCGC GCGAAATCCG CCTTCCTCGC CAATATGAGC CACGAGTTGC GCACCCCGAT GAACGGTGTG GTCGCCATGT CCGAGCTGCT CAACGAAAGC GCGCTGGACG AGGAGCAGGC GCTTTACGTG GAGACGATCC GCAAATCGGG CGAAGCGCTT CTGGTGATCA TCAACGATGT GCTCGACTAC TCCAAGATGG AAGCGGAGAA GCTGCAACTG CATCCCGCGC CCTTCGACTT GGAACGGTTG ATGCATGATG TGGTGATGCT GACCAAGCCC ACCGCACAGG AGAAGTCGGT GGACCTGATG CTCGACTACG ACATCTTCCT GCCGAGCCAT TTCATCGGCG ACCAGGGGCG GTTGCGCCAG GTAATGACCA ACCTGCTAGG CAATGCGGTA AAGTTCACCC TGGAGGGACA TGTGCTGATC CGGGTGATCG GGATGCCGCC GGAAGACGGC ACGCAGGAGA TCATCGTCAG CATCGAGGAT ACCGGGATCG GCATCGCGCC GGAGATGATC GATCACATCT TCGGCGAGTT CAACCAGGCC GAGGACGAAC GCAACCGCGC CTTCGAGGGC ACGGGCCTGG GGTTGGCCAT CACCAAGCAA CTGATTGACC TGATGGGTGG CGAGATCTGG GTGGATTCCG AGATCGGCGA AGGCTCTTGT TTTTCGTTCC GGATCGCCTT GCCACTGGAT GCCGCAGACG GGGAGCCGCC CCTGTCGGTG TCGTCCGAGC TGCGCCGGGT GCTGATCGTG GAGGAAGGCG AGTTGAACCG CTCGATCCTG GAGCGTCAAC TGGCACCCTT GGGCGTGTCC GTGGCGCTCG CGACCTCGGC CGAGGAGGCG TTGAGTTATC TGGATGCCAA TCCGGATGTG GACGCGGTGC TGACCGATCT GGTCATGCCC GGCCTGTCGG GCAGCGAACT GGCCCGCCGC GTGCGGGATC GGGTGGGAGG GCCGCCGGTG ATCCTGCTCA GCTCGGCGAT GCTGGGGCAG TTGACTGCAG AGGATCGCAA CCTGTTCGAG GTGACCTTGA ACAAGCCGGT GATGCGCGCC GATCTTTATG CGGCGCTGAA TACCCTTGCC CAGCGGAACA AGGTGCTGAA GCTCACCGAT CCGATCACCG AGGACGCAGG CCCTCCGGCC GGTGCGGAGG TGATCTCAAT GATCCCTGCT TCTGCCCCGC CCGCCCTGGA CCCGGTGGTG GAGCCGGGGC CGTTCGTGTC GGCCCGCGCC GCCAAGGTCG CCCGGGAGGC GACACCCGCA TCTTTCGTGT CGGCCAAAGC CACGCAGCAG GCGCCGGACC TGCCCAAAGT CCCGGTGGCG CCACACGACG GGACCATGGA TCCGGACCCC GTGCAGGAAA CCGACGCGCC GGTTGAAGCC CCGGCCCCGA GAGATGTCGC GCCTGCAGAG GCCGAAGTTC CCATACGCAA GACCAGCGTG CTGGCAGCCG AGGACAACAA GACGAACCAG CTTGTGTTTC GCAAGATGGT GAAGGGACTC AATATCGATC TGCGCTTTGC CAACAATGGC GAAGAGGCTG TCGCCGCCTT TGAAGAAGAC CGTCCGGACA TGATCTTCAT GGATATCTCG ATGCCCAAGA TGGACGGGAT GGAGGCCACC CAGAAGATCC GCGCGCGGGA GGCGGAACTG AGCCTGCCGC CGGTGCCGAT CTGCGCGCTG ACCGCGCATG CCATGGACGG CGACGCAGAA AGGATCCTTG CCGCCGGATT GGATCACTAC CTGACCAAAC CGCTGAAGAA GACGGAAATT CACGCGCGTA TCGAGGCGCA GGTCCCCGCG GGGCGTTTAC CCCTGATCGA GGAGCGCTAG
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Protein sequence | MQSAEIESKL AAERRARLTA ERLLAQKQEE LYAANQKLSR HAFTLSDQIV EQRHAAEELK DENFQVRSDL RRAEQRLWTS FETIEDGFAV FDASRRLVLA NPAYVSIFDG LEDVAPGIGY AELLRLCAEE GIIDTEGLSR QDWCAQMEMR WNGAQIEPAV VRLWNGFSIK LVERRGEDGD IVSLCLNITD TIKREQELTL ARTRAEAANR AKSAFLANMS HELRTPMNGV VAMSELLNES ALDEEQALYV ETIRKSGEAL LVIINDVLDY SKMEAEKLQL HPAPFDLERL MHDVVMLTKP TAQEKSVDLM LDYDIFLPSH FIGDQGRLRQ VMTNLLGNAV KFTLEGHVLI RVIGMPPEDG TQEIIVSIED TGIGIAPEMI DHIFGEFNQA EDERNRAFEG TGLGLAITKQ LIDLMGGEIW VDSEIGEGSC FSFRIALPLD AADGEPPLSV SSELRRVLIV EEGELNRSIL ERQLAPLGVS VALATSAEEA LSYLDANPDV DAVLTDLVMP GLSGSELARR VRDRVGGPPV ILLSSAMLGQ LTAEDRNLFE VTLNKPVMRA DLYAALNTLA QRNKVLKLTD PITEDAGPPA GAEVISMIPA SAPPALDPVV EPGPFVSARA AKVAREATPA SFVSAKATQQ APDLPKVPVA PHDGTMDPDP VQETDAPVEA PAPRDVAPAE AEVPIRKTSV LAAEDNKTNQ LVFRKMVKGL NIDLRFANNG EEAVAAFEED RPDMIFMDIS MPKMDGMEAT QKIRAREAEL SLPPVPICAL TAHAMDGDAE RILAAGLDHY LTKPLKKTEI HARIEAQVPA GRLPLIEER
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