| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3331 |
|---|
| Symbol | bktB |
|---|
| ID | 5712389 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 3495749 |
|---|
| End bp | 3496933 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641269260 |
|---|
| Product | beta-ketothiolase |
|---|
| Protein accession | YP_001534665 |
|---|
| Protein GI | 159045871 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATTGG ATCAAGACAT CGTCATTCTC GACGGCGCCC GCACGGCGAT CGGCACGTTC
GGCGGCAGCC TCGCGGGCAC GGCCCCGATT ACGCTGGGGG CCACGGTGGC CAAGGCCGCG
CTGGAGCGGT CCGGGGTGGA AGGCGCGCAG ATCGGTCATG TGGTCTTCGG ACATGTGATC
AATACCGAGC CGCGCGACAT GTATCTGTCG CGGGTCGCCG CGATGGAGGC CGGGATCCCC
GACACGACAC CGGCGATGAA CGTCAACCGG CTGTGCGGCT CCGGGGCGCA GGCGCTGGTC
TCGGTGATCC AGTCGCTGAT GTTGGGCGAT GCGCAGTTCG GACTGGCCGG CGGGGCCGAG
AGCATGAGTC GGTCGCCCTA TGCGATGCCG GTCGCCCGCT GGGGCCAGAA GATGGGCGAT
GCCACGGCGA TGGACATGAT GCTGGGGGCT TTGAACTGCC CCTTCGGCAC CGGGCACATG
GGGGTGACCG CCGAGAATGT CGCCGCCGAG CATGGTATCG GCCGTGCAGA CCAGGACGCC
TTCGCCTTGG AAAGCCAGGC CCGCGCTGCC CGCGCCCAGG AAGCCGGGCA TTTCAACAGC
CAGATCGTGC CGGTGCCGGT CAAGGTGAAG CGCGACATGG TGGATTTCGT GCGCGACGAG
CATCCCAAGC CCACCACGGC GGAGGCACTG GCCGGTCTGC GCACGGTGTT CCAGAAGGAC
GGCACGGTCA CGGCGGGCAA TGCGTCGGGA ATCAATGACG GGGCGGCGGC GCTGGTTCTG
GCACGCGCCT CGGCGGCCGA GAGCGCCGGG TTGAAGCCGC GCGCGCGGAT CCTCGGCTAT
GCCCATGCCG GGGTGCGGCC CGAGGTGATG GGTATCGGCC CGGTGCCCGC GGTGCAGGCC
CTGCTGGCCA AGACCGACCT GAGCGTCTCG GATTTCGATG TGATCGAGAG CAACGAGGCC
TTCGCGGCCC AGGCGCTGGC GGTCAACAAG GGGCTTGGCC TCGATCCGGC GAAGGTGAAC
CCCAATGGCG GGGCGATTGC GCTTGGCCAT CCCGTGGGCG CCACCGGCGC GATCATCGCC
CTCAAGGCGC TCTACGAGTT GGAGCGTATC GGCGGTAAAC GCGCCCTCGT GACCATGTGC
ATCGGAGGCG GGCAGGGAAT CGCCCTCGCA TTCGAAGCGC TTTAA
|
|---|
| Protein sequence | MPLDQDIVIL DGARTAIGTF GGSLAGTAPI TLGATVAKAA LERSGVEGAQ IGHVVFGHVI
NTEPRDMYLS RVAAMEAGIP DTTPAMNVNR LCGSGAQALV SVIQSLMLGD AQFGLAGGAE
SMSRSPYAMP VARWGQKMGD ATAMDMMLGA LNCPFGTGHM GVTAENVAAE HGIGRADQDA
FALESQARAA RAQEAGHFNS QIVPVPVKVK RDMVDFVRDE HPKPTTAEAL AGLRTVFQKD
GTVTAGNASG INDGAAALVL ARASAAESAG LKPRARILGY AHAGVRPEVM GIGPVPAVQA
LLAKTDLSVS DFDVIESNEA FAAQALAVNK GLGLDPAKVN PNGGAIALGH PVGATGAIIA
LKALYELERI GGKRALVTMC IGGGQGIALA FEAL
|
|---|
| |