| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3327 |
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| Symbol | dctQ1 |
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| ID | 5712384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3491612 |
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| End bp | 3492154 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641269255 |
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| Product | TRAP transporter - DctQ subunit |
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| Protein accession | YP_001534661 |
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| Protein GI | 159045867 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCGCCA TGTTCCGAAA GGTCCTCGAG ACCGCCCTGG AATGGTTCGT CATCTTCCTG
ATGGTGTTTC TGACCGTCAT CGTCATCGTC GCGGTTCTGT GGCGTCTCGC CGGGTCCAGT
TTCAGCTGGT ACGACGAGGT CGCCGCGATC CTGCTGGCCT GGATCACCTA TTACGGGGCG
GCGCTGGCCG CGTTGCGCCG CCGCCATATC GGGTTCGACT CGGTGCTTCT GTCGATCCCC
ATGCCCGCGC GGATGTGGGC GGTGGCCCTT GCCGAGGCGG TCACGGCGGG CTTTTTCCTG
TTGCTGGCCT GGGCCGGGTT CACGGTGCTG ACGGTGATGA CCGGCATGAA CCTGATCTCG
CTGACCTGGG TGCCGATCAC CTTCACCCAA TCGGTCATTC CCATCGGCGC GGTGCTGTTC
CTGATCTGCC AGGCGCTGAG CCTGCCGGAG TATTGGGCCA AATGCGCGGC CGGTATCTCG
CTGGAACATG CGGAGATCGA AGAAGAGGTC GAGCAGGAAA TGAAGAAAGC GGGGAACGCC
TGA
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| Protein sequence | MLAMFRKVLE TALEWFVIFL MVFLTVIVIV AVLWRLAGSS FSWYDEVAAI LLAWITYYGA
ALAALRRRHI GFDSVLLSIP MPARMWAVAL AEAVTAGFFL LLAWAGFTVL TVMTGMNLIS
LTWVPITFTQ SVIPIGAVLF LICQALSLPE YWAKCAAGIS LEHAEIEEEV EQEMKKAGNA
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