Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3324 |
Symbol | dld2 |
ID | 5712381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 3486236 |
End bp | 3489157 |
Gene Length | 2922 bp |
Protein Length | 973 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641269252 |
Product | D-lactate dehydrogenase |
Protein accession | YP_001534658 |
Protein GI | 159045864 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAATGA TGGAGAAATC GCCACTGGCC TCGCGCCTCG CCGGGAAGAT CGAGGGCGAG CTGCTCTTCG ACGCCTTCTC GCGCGGGCGC TATGCGACAG ACGCGTCCAT CTATCAGATG ACCCCGCTCG GCGCGGTGGT CCCAAAATCC CTGGACGACA TCGAAACCGC GCTGGGGGCA GCGCGCGAAT TGGGCGCCTC GGTCCTGCCG CGCGGGGGCG GCACGTCCCA ATGCGGCCAG ACGGTCAACC ATTCCCTGGT CCTCGACAAT TCCAAGTATT TCAACCGGAT CCTCGATCTG GACGTGGCAA ACCGGCGCTG CGTCGTGCAA CCGGGCATCG TGCTGGACGA GCTGAACCGC GCGTTGAAGC CCCACGGGTT GTGGTTTCCC GTGGATGTCT CCACCGCCTC CCGCGCCACC ATCGGCGGGA TGGCCGCCAA CAACTCCTGC GGGGGGCGGT CCCTGCGCTA CGGAACCATG CGCGACAACG TGCTGTCGAT CGAAGCGATC CTCGCGGACG GCACCCGCAC CACCTTCGGC CCGGTGGATC GCAACGGCGT TCTCGGCAAC GACCCCACCT CGGCCCTGAT CTCCGAAATG CTGGCACTGG GCGCGCGGGA ACAGGCCGAG ATCGCCGCGC GCTTTCCCAA CATCATCCGG CGCGTGGGCG GCTACAACAT CGACGCCCTG ACCCCGGATC ATGCGCGCAA CAACATGGCC CACCTGCTGG TCGGCTCCGA AGGCACGCTG GGCTATTTCA CCGCCATCGA GTTGAAACTG TCGCCCCTGC AATCGACCAA GGTCACCGGG GCCTGCCATT TCCCGACCTT CCATGCCGCG ATGGACGCGG CACAACATCT CGTCCCGCTG AAACCGGCCG CGGTGGAGCT TGTGGACGAC ACGATGATCG CGCTTGCCCG CGACATCCCG ATGTTTCGTC AGACAATCAG TCAATTTGTG CAGGGCGACC CGGCGGCGCT GCTGCTCGTG GAATTTGCCG AAGGCTCCGA TGCGGCGAAC GCGGCGAAAC TCGAAGAATT GTCAGACAAA ATGGCCGCGC TCGGCTTCGG CTTCGACCGC AGCGGCAAGC ACTGGGGCGG TTCGGTCGCC GTGACCGATT TGAAGCTCCA GAACGACATC GGCGAGGTGC GCAAATCGGG CCTCAACATC ATGATGTCGA TGAAATCCGA GGGCAAACCG GTCTCCTTTG TCGAGGATTG CGCGGTGGAG CTGCCGGATC TCGCCGCTTA TACTGCCGGG CTGACCGAGA TCTTCGAGAA ACACGGCACC AAGGGCACCT GGTATGCCCA TGCCTCGGTC GGCTGCCTCC ATGTCCGGCC GGTGCTGAAC ATGAAGCTCG ACAAGGACGT CAAGACCATG CGCGCCATCG CGGAAGAGTG CTTCGACCTT GTCGCCCATT ACAAGGGCTC CCATTCCGGC GAACACGGCG ACGGCATCGT GCGCAGCGAA TTCCACGAGA AGATGTTCGG CCCGCAGATG GTCGCCAGCT TCAATGAGGT GAAGGACCGC TTCGACCCCA ACCGCCTCTT CAACCCCGGA AAGATCGTCC AGCCGCCCAA GATGGATGAC CGGCGGCTCT TTCGCTACGG GCCCGACTAC ACCGTGAAAC CGATGAAAAC CGCGCTTGAC TGGTCCGCAT GGCCCGGGGC CGGGGGCGGG TTCCAGGGCG CGGTAGAGAT GTGCAACAAC AACGGCGCCT GCCGCAAGCT GAAGGGCGGG GTGATGTGCC CCTCCTACCG GGTGACCCGG AACGAGCGGG ACGTTGTGCG CGGGCGGGCC AACTCCCTCA GGCTGGCGAT CTCGGGGCAG CTCGGGCCGG ATGCCTTTGC ATCCGACGAC ATGGTCTCGG CCATGAAACT GTGCGTGTCC TGCAAGGGCT GCAAGCGCGA ATGTCCGACC GGCGTGGACA TGGCCAAGAT GAAGATCGAG GTGCTGGCCG CCCGGGCCGA GAAACACGGG CTGTCCTTCC ACGACAAGCT GGTGGGTTAC ATGCCCGCGT ATGCCCCGTT CGCCGCGAAA CTGCCCTGGC TCGCCAATGC CCGCAACTGG CTGCCCGGGG CGGCGAAGCT GACCGAGCGC CTGACCGGGT TCGCGGCAAG CCGCAAATTG CCGGCCTGGT CCAATGACCC GTTTCTCGAC ACGGAGTTCC AGGACGCCGA CCCGGACGTG GTGCTCTGGG CGGATATCTT CAACCGCTAC TTCGAGCCGG AGAACCTGCG CGCCGCGGGC CGGGTGCTGC GGGCGGCGGG GCTGCGGGTG GCCGTGGTCC GGCCCGCCGA CGGCAAGGAT CCGCTCGATT GCGGGCGGAC ATACCTCGCC GTGGGGCTGG TGGAGGAGGC GCGCGCCTCC GCCCGCCGGG CGCTCAAGGC CCTCGTCCCC CATGCCGAGA AGGGGGTGCC CATCGTCGGG CTGGAGCCCT CGTCGCTCCT GACCCTGCGG GACGAATGGC CGGTGCTGGT GCCCGGCCCG GAGGCCGATC TCGTGGCCCA GCACGCGCTG ATGCTGGAGG AGTATCTCGT TCGCAACGAA ATCGCCCTGC CGCTGAAACC CCTCGGCCGA CCCATCCTGC TGCACGGGCA TTGCCACCAG AAGGCCCATA ACGTGATGCC GGATGTCCAG AAGACGCTGG CGATGATCCC GCAGGCGGAG GTGTCGGTGG TCGAGACCAG CTGCTGCGGC ATGGCCGGGG CTTTTGGATA TGGCAAGGAT ACGGTAGAAA CCTCCCTCAA GATGGCCGAG CTGGACCTGT TGCCCGCGGT GCGGGCCGCG GCGCAGGACG CGCTGGTGGT GGCCGATGGC ACCTCTTGCC GCCACCAGAT CAAGGACGGC GCCGCGCGGG AGGCGATCCA TGTCGCCCGG ATCCTGGAGA TGGCGCTCGA TGCCGGTGGA AAGGGAGCCT GA
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Protein sequence | MGMMEKSPLA SRLAGKIEGE LLFDAFSRGR YATDASIYQM TPLGAVVPKS LDDIETALGA ARELGASVLP RGGGTSQCGQ TVNHSLVLDN SKYFNRILDL DVANRRCVVQ PGIVLDELNR ALKPHGLWFP VDVSTASRAT IGGMAANNSC GGRSLRYGTM RDNVLSIEAI LADGTRTTFG PVDRNGVLGN DPTSALISEM LALGAREQAE IAARFPNIIR RVGGYNIDAL TPDHARNNMA HLLVGSEGTL GYFTAIELKL SPLQSTKVTG ACHFPTFHAA MDAAQHLVPL KPAAVELVDD TMIALARDIP MFRQTISQFV QGDPAALLLV EFAEGSDAAN AAKLEELSDK MAALGFGFDR SGKHWGGSVA VTDLKLQNDI GEVRKSGLNI MMSMKSEGKP VSFVEDCAVE LPDLAAYTAG LTEIFEKHGT KGTWYAHASV GCLHVRPVLN MKLDKDVKTM RAIAEECFDL VAHYKGSHSG EHGDGIVRSE FHEKMFGPQM VASFNEVKDR FDPNRLFNPG KIVQPPKMDD RRLFRYGPDY TVKPMKTALD WSAWPGAGGG FQGAVEMCNN NGACRKLKGG VMCPSYRVTR NERDVVRGRA NSLRLAISGQ LGPDAFASDD MVSAMKLCVS CKGCKRECPT GVDMAKMKIE VLAARAEKHG LSFHDKLVGY MPAYAPFAAK LPWLANARNW LPGAAKLTER LTGFAASRKL PAWSNDPFLD TEFQDADPDV VLWADIFNRY FEPENLRAAG RVLRAAGLRV AVVRPADGKD PLDCGRTYLA VGLVEEARAS ARRALKALVP HAEKGVPIVG LEPSSLLTLR DEWPVLVPGP EADLVAQHAL MLEEYLVRNE IALPLKPLGR PILLHGHCHQ KAHNVMPDVQ KTLAMIPQAE VSVVETSCCG MAGAFGYGKD TVETSLKMAE LDLLPAVRAA AQDALVVADG TSCRHQIKDG AAREAIHVAR ILEMALDAGG KGA
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