Gene Dshi_3313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3313 
Symbol 
ID5712370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3476196 
End bp3476906 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content69% 
IMG OID641269241 
Producthypothetical protein 
Protein accessionYP_001534647 
Protein GI159045853 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.425102 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGACC TGCCAAACCC CGAGACGCCC GCCGAGGCAT CGGCCCTGCG GCTGATGGAT 
TGCCCCAACT GGGTGTACCT GTTGCGGGAG TTCGACGCGC TCTACCGCTA TGGCTCTGCC
GGGGGCAGCC CCGCGATCCG CAGTCATCGC AAGCGGGTGC GCGACCGGCT GTCGGCCGTT
TTGGCGGCCA ATCCGGCGAT GGTCGACCGC CCGCGGGAGA CCAAGCCCGT GGTGGCCCAT
TTCGCCCGGG CGCTGGACCT CGGGGAGCGG GCCGCGATGC AGGGGATGGT GCGGGCCCTG
CGGGAAGTGA AGGACGACCT GACCTGGGAA TACGGGTATG AGAAGGTGCC CAAGGCGCTG
GCGCAGAAAT ACGCCTATTG CGAGGTCTTG GGGCCGCGGG GGCCGGTGCA GGGGACGACC
CTGACCCTGG GCTTCGTGCT GTTCGCGCCG AATACGACCT ATCCGCAGCA CAGCCATCAC
GACATCGAGG AAAGCTATAC CTCGGTCTCC GGCGCCTGGT CGGAGAACAA CGCGGCGGTC
TTTGCGCCCG GATCGCTGAT CTTGAACACG TCCGGCCACG AGCATCGGAT CACGACTGGC
GATCGCGACC CGTGCCTGTT GGCCTATGCC TGGGCCGGTC CGGCGGAGCG TCTGGCCACA
CCGGACATGA AGCTGACCGC CCCGCGGCGG GCGCGGGGCG CGGGGGTCTA G
 
Protein sequence
MPDLPNPETP AEASALRLMD CPNWVYLLRE FDALYRYGSA GGSPAIRSHR KRVRDRLSAV 
LAANPAMVDR PRETKPVVAH FARALDLGER AAMQGMVRAL REVKDDLTWE YGYEKVPKAL
AQKYAYCEVL GPRGPVQGTT LTLGFVLFAP NTTYPQHSHH DIEESYTSVS GAWSENNAAV
FAPGSLILNT SGHEHRITTG DRDPCLLAYA WAGPAERLAT PDMKLTAPRR ARGAGV