Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3313 |
Symbol | |
ID | 5712370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 3476196 |
End bp | 3476906 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641269241 |
Product | hypothetical protein |
Protein accession | YP_001534647 |
Protein GI | 159045853 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.425102 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGGACC TGCCAAACCC CGAGACGCCC GCCGAGGCAT CGGCCCTGCG GCTGATGGAT TGCCCCAACT GGGTGTACCT GTTGCGGGAG TTCGACGCGC TCTACCGCTA TGGCTCTGCC GGGGGCAGCC CCGCGATCCG CAGTCATCGC AAGCGGGTGC GCGACCGGCT GTCGGCCGTT TTGGCGGCCA ATCCGGCGAT GGTCGACCGC CCGCGGGAGA CCAAGCCCGT GGTGGCCCAT TTCGCCCGGG CGCTGGACCT CGGGGAGCGG GCCGCGATGC AGGGGATGGT GCGGGCCCTG CGGGAAGTGA AGGACGACCT GACCTGGGAA TACGGGTATG AGAAGGTGCC CAAGGCGCTG GCGCAGAAAT ACGCCTATTG CGAGGTCTTG GGGCCGCGGG GGCCGGTGCA GGGGACGACC CTGACCCTGG GCTTCGTGCT GTTCGCGCCG AATACGACCT ATCCGCAGCA CAGCCATCAC GACATCGAGG AAAGCTATAC CTCGGTCTCC GGCGCCTGGT CGGAGAACAA CGCGGCGGTC TTTGCGCCCG GATCGCTGAT CTTGAACACG TCCGGCCACG AGCATCGGAT CACGACTGGC GATCGCGACC CGTGCCTGTT GGCCTATGCC TGGGCCGGTC CGGCGGAGCG TCTGGCCACA CCGGACATGA AGCTGACCGC CCCGCGGCGG GCGCGGGGCG CGGGGGTCTA G
|
Protein sequence | MPDLPNPETP AEASALRLMD CPNWVYLLRE FDALYRYGSA GGSPAIRSHR KRVRDRLSAV LAANPAMVDR PRETKPVVAH FARALDLGER AAMQGMVRAL REVKDDLTWE YGYEKVPKAL AQKYAYCEVL GPRGPVQGTT LTLGFVLFAP NTTYPQHSHH DIEESYTSVS GAWSENNAAV FAPGSLILNT SGHEHRITTG DRDPCLLAYA WAGPAERLAT PDMKLTAPRR ARGAGV
|
| |