| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3311 |
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| Symbol | |
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| ID | 5712368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3474155 |
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| End bp | 3475375 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641269239 |
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| Product | radical SAM enzyme |
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| Protein accession | YP_001534645 |
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| Protein GI | 159045851 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
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| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.853243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGGG CTTTCCCAAG TTTATCGAGC ATGCCCATGT CCGCCACGTC GCCGATCACG
CAGGATGTCG TCACCTTTCC GCGCAAGCTG CCGGAGGGGG GCAAGCGCAA TCTCGTGGGC
CTGACCCGGC CCGAACTGGC CGAGGCGCTG GCAGCGGCGG GCACGCCCGA AAAGCAGGTC
AAGATGCGGG TCAATCAGAT CTGGCAATGG CTTTATGAAC GCGGCGTGCG CGATTTCAAC
GACATGACGA ACCTCGCCAA GCCCTACCGC GCCCTGCTGG CCGATCAGTT CGAGATCGCC
GTGCCGGAGG TCGTCAGCCG CCATGTCTCG GAGGACGGGA CGCGCAAGTA CCTGGTGCGG
ATCGCGGGCG GGCACGAGGT GGAGGTCGTC TATATCCCCG AGGAGGATCG CGGCACGCTG
TGTGTCTCGT CCCAGGTGGG CTGCACCCTG ACCTGTTCGT TCTGCCACAC GGGCACGCAA
AAACTGGTGC GCAACCTGAC CGCGGGCGAG ATCGTCGGCC AGATCATGAT CGCGCGCGAC
GATCTGGGCG AGTGGCCCCT GCCGGGGCGG AACCCCAAGA ACGAGACCCG GCTTTTGTCC
AATATCGTCC TGATGGGGAT GGGTGAGCCG CTTTACAATT TCGAGGCAGT GCGCGACGCG
ATGAAGATCG CCATGGACCC CGAGGGCATC AGCCTGAGCC GTCGGCGGAT CACGCTCTCG
ACCTCGGGCG TGGTGCCCGA AATCGCCCGG ACCGCCGAAG AGATCGGCTG CATGCTGGCG
GTGTCGTTCC ATGCGACCAC GGACGAGGTG CGCGACAAGC TGGTCCCGAT CAACAAGCGC
TGGAACATTG CCACCCTGCT CGACGCGCTG CGGGACTATC CCAAGGCCAG CAATTCCGAG
CGGATCACGT TCGAATACGT CATGCTCAAG GGCGTCAATG ACAGTGACGA GGATGCGCGG
CGGCTGGTCG AGCTGATCAA GGGCATTCCG GCCAAGATCA ACCTGATCCC GTTCAACGAG
TGGCCCGGCG CGCCTTATGA GCGGTCCTCG AACAACCGCA TCCGGGCGTT TGCCGACATC
ATCTACAAGG CCGGGTATGC CAGCCCGATC CGCACCCCTC GGGGCGAGGA TATCATGGCC
GCCTGCGGGC AGTTGAAATC CGCGACCGAG CGCGCGCGCA AGTCCCGCGC GCAGATCGCC
GCCGAAACCG GGCTGGGATA A
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| Protein sequence | MSRAFPSLSS MPMSATSPIT QDVVTFPRKL PEGGKRNLVG LTRPELAEAL AAAGTPEKQV
KMRVNQIWQW LYERGVRDFN DMTNLAKPYR ALLADQFEIA VPEVVSRHVS EDGTRKYLVR
IAGGHEVEVV YIPEEDRGTL CVSSQVGCTL TCSFCHTGTQ KLVRNLTAGE IVGQIMIARD
DLGEWPLPGR NPKNETRLLS NIVLMGMGEP LYNFEAVRDA MKIAMDPEGI SLSRRRITLS
TSGVVPEIAR TAEEIGCMLA VSFHATTDEV RDKLVPINKR WNIATLLDAL RDYPKASNSE
RITFEYVMLK GVNDSDEDAR RLVELIKGIP AKINLIPFNE WPGAPYERSS NNRIRAFADI
IYKAGYASPI RTPRGEDIMA ACGQLKSATE RARKSRAQIA AETGLG
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