Gene Dshi_3303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3303 
Symbol 
ID5712360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3467405 
End bp3468508 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content70% 
IMG OID641269231 
Producthypothetical protein 
Protein accessionYP_001534637 
Protein GI159045843 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTGT CAATGGCGCT GCTCCGGGCC GCGCAGGCCG GGGCCCATGA AATCCGCCCG 
GCGGTCGCCG ATGTGATCAT CGGGCCGGAC CGGGCCGAGG TGGTGGTGCA ACTGACCGCC
GAGGCGCTGG TGGCCGGGAT CGACGTCACG GGGATCGAGG ATACCGACGA GGCCCCAGAG
GCCGAGGTCT ATGACGCCCT GCGCGCCCTG CCGCCGGACG AGATGGCCGC GGCCCTGCGC
GCGGCCTGGC CCGAGGTCGC CCGCGGTTTT ATCGCCGAGG TGGACGGCGC GCGGCTCGAT
TGGGTGCTGC GCCAGGTGCG GATCGCCGAC GAGCCGGAGC TGGAGCTGCC TCGCGACACC
CAGATCACCG CCGAGATCGC CCTGCCGCCG GGGGAGGCGC CCGTGGTGCT GGGCTGGGTG
GCGGCGAACG GGCCGCTGGT GGTGCGCCAG AACACCGAGG ACGGCGGGGA GGGGTATTCG
GGGTACCTCA CCGATGGGGC GTTGAGCGCG CCCTTGCCCC GGACCGGCAC CGCGACGCAG
TCCATCGGCG CGGCCTTCGT TGATTATATC GGGATCGGGT TTGCCCATAT CGTGCCCAAG
GGGCTGGACC ATATCCTGTT CGTGCTGGGC CTGTTCTTCT TCAGCCTGGC GCTGAAGCCG
CTGGTGTTCC AGGTCACGGC CTTCACGCTG GCCCATACCG TGACGCTGGC GTTGGCGACG
CTGGGGCTTG TTTCGGTGCC GCCCGCCATC GTCGAGCCGC TGATCGCGCT TTCGATCGTC
TACATCGCGG TGGAGAACAT CCTCGGCGGT GCCATCGGCT GGCGGCGCAC GGCGGTGGTG
TTCGGGTTCG GGCTGCTGCA CGGGCTGGGC TTTGCCAGCG TGCTGGGCGA GATCGGGCTT
GATCCGGCAC GGTTCCTGAC CGGGCTGATC GGGTTCAATA TCGGGGTGGA ACTGGGACAG
CTCGCCGTGC TGGCGGCGGC CTTCGTGTTG CTGGGCCTGC CGTTCGGGCG GATGGACTGG
TACCGGCCCG CGGTGGCTGT CCCGGCCTCG GTCGGTATCG CCCTGGTCGG GGCCTGGTGG
GCGGTGGAGC GGGTGTTTCT CTAG
 
Protein sequence
MLVSMALLRA AQAGAHEIRP AVADVIIGPD RAEVVVQLTA EALVAGIDVT GIEDTDEAPE 
AEVYDALRAL PPDEMAAALR AAWPEVARGF IAEVDGARLD WVLRQVRIAD EPELELPRDT
QITAEIALPP GEAPVVLGWV AANGPLVVRQ NTEDGGEGYS GYLTDGALSA PLPRTGTATQ
SIGAAFVDYI GIGFAHIVPK GLDHILFVLG LFFFSLALKP LVFQVTAFTL AHTVTLALAT
LGLVSVPPAI VEPLIALSIV YIAVENILGG AIGWRRTAVV FGFGLLHGLG FASVLGEIGL
DPARFLTGLI GFNIGVELGQ LAVLAAAFVL LGLPFGRMDW YRPAVAVPAS VGIALVGAWW
AVERVFL