Gene Dshi_3302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3302 
Symbol 
ID5712359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3467100 
End bp3467408 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content68% 
IMG OID641269230 
Producthypothetical protein 
Protein accessionYP_001534636 
Protein GI159045842 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGC CAGAAAACAC ACGGCGCGAC GGCCCCCTGA CCCTCCGCGA CGCCCGCCTG 
ATCGGGAGCA GCTTCACCGA CGTCACCCTG GAAAACAGCG TGTTCGAGAG CGCCAATCTC
GCCGATTGCC GGTTCGAGGA TGTCACCCTG GCCGGCAGCC TCATCCGCGA CGGCAATCTC
GACCGGCTGG AGCTGGAGGA CGTCTCCCTG CGCAATGCCG CGATCCGCAA CGCGGATGTG
ACCGGCATGA CCATCGACGG CATCCCGGTC ACCGCGCTGC TGGCCGCCTG GCGCGCCAAG
CAGGGCTAG
 
Protein sequence
MSEPENTRRD GPLTLRDARL IGSSFTDVTL ENSVFESANL ADCRFEDVTL AGSLIRDGNL 
DRLELEDVSL RNAAIRNADV TGMTIDGIPV TALLAAWRAK QG