| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3299 |
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| Symbol | petR |
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| ID | 5712356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3464567 |
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| End bp | 3465280 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641269227 |
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| Product | DNA-binding response regulator PetR |
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| Protein accession | YP_001534633 |
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| Protein GI | 159045839 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGACG AAGACGCCCA TCTGCTGATC GTGGATGACG ACGAGCGCAT CCGCACGCTC
TTGCAGAAAT TCCTGATCCG GAACGGATTC TGGGTTTCGG CGGCCCGGGA TGCGGCCCAG
GCGCGGCGGC TGCTGGCCGG TCTGGATTTC GACCTGATCG TGCTCGACGT GATGATGCCC
GGCGAGGATG GCGTTGCCCT GACCAGATCC CTGCGCGAGA CGCGGGAGAC GCCGATCCTG
CTGCTGACGG CGAAGGGGGA GGCGACCGAC CGGATCGCGG GGCTTGAGGC AGGGGCGGAT
GACTACATCG CCAAGCCGTT CGAGCCCAAG GAGCTGCTGC TGCGGATCAA CGCGGTGCTG
CGCCGGGTGC CCAAGACCGA CGAGCCCGCG GCCCGGCCCA AGGTGCTGCA TCTCGGCCCG
GTGCGCTACG ACGTGGAGCG CGGCGAGATG TGGCGCGGCG ACGAGCCCGT GCGCCTGACC
GCGACCGAAA GCGCCCTGAT GCGGATCTTC GCGTCCTGTC CCGGCGAGGC GCTGAGCCGG
TCCAAGCTTG TCGATGATCT GGGCCGGGGC AGCGGCAGGG ATGGCGGACA GGCCCAGGAA
CGCGCGGTGG ACGTGCAGAT CACCCGCCTG CGCCGCAAGA TCGAGGCTGA TCCGAAGCAA
CCCCGCTTCC TGCAGACCGT CCGCGGGGCA GGCTACATGC TGTCGGTGGA GTGA
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| Protein sequence | MQDEDAHLLI VDDDERIRTL LQKFLIRNGF WVSAARDAAQ ARRLLAGLDF DLIVLDVMMP
GEDGVALTRS LRETRETPIL LLTAKGEATD RIAGLEAGAD DYIAKPFEPK ELLLRINAVL
RRVPKTDEPA ARPKVLHLGP VRYDVERGEM WRGDEPVRLT ATESALMRIF ASCPGEALSR
SKLVDDLGRG SGRDGGQAQE RAVDVQITRL RRKIEADPKQ PRFLQTVRGA GYMLSVE
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