| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3297 |
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| Symbol | |
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| ID | 5712354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3463042 |
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| End bp | 3463983 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641269225 |
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| Product | histone deacetylase family protein |
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| Protein accession | YP_001534631 |
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| Protein GI | 159045837 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCG CTGTCTATAC CCATTCCGAG TGTCTGTCAC ACGTCACGCC CCCGGGCCAT
CCCGAGCAGG TCGCGCGCCT TGTTGCGGTG GCCGAGGCGC TGGACACCCC CGGTTTTGCC
GCGCTGGAGC GCCGGTCCGC GCCCCTGGGC GAGATCGCGG ATATCCTGCG CTGCCACCCG
CAGGGGTACG TCGACCGGGT ACGCGCCGCG ATCCCCGAGG AAGGCGCGGG TGTGGTGTCG
CTGGATGCCG ATACGCATGT GATGTCCGGG TCCTGGAACG CGGCCCTGCG CGGGGTCGGC
GGAGTCTGCG CGGCGGTGGA TGCGGTGCTG GCCGGAGAGG TCGGCAATGC CTTTGTCGCC
TGTCGCCCGC CCGGCCACCA TGCGGAGACC GAGACCGCGA TGGGGTTCTG CCTGTTCGGG
AATATCGCCA TCGGGGCGAA GCGAGCGCTG GATCACCACG GGCTCTCTCG GGTGGCGGTG
GTGGATTTCG ACGTCCACCA TGGCAATGGC ACTCAGGACC TGCTCTGGGA CGAGGCGCGG
GCGTTCTTCA TCTCGAGCCA CCAGATGCCG CTCTATCCCG GCTCCGGCGC GCGGCACGAG
ACCGGCGCCC ATGGCAATGT CTTCAACCTG CCCTTCCCGC CCGACACCGC AGGCCCCGCC
TTCCGGCGGC AGTACGAGGC GGAGGTATTT CCGGCCCTGG AAAACTTCCG GCCCGAACTG
ATCCTGGTCT CGGCCGGGTT CGACGCGCAC CGGGCGGACC CGCTGGCGCA GATGGCGCTG
GTGGAGGAGG ATTTCGCCTG GGTGACGGGT CGGCTGTGCG AGATCGCGGC GGAATTCTGT
GACGGGCGCG TGGTCTCCAC CCTCGAAGGG GGCTATGATC TGCCCGCCTT GGGGGCGAGC
ACCGCCGCCC ATGTAAAGAC CCTGATGGAG CACGCGCAAT GA
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| Protein sequence | MSTAVYTHSE CLSHVTPPGH PEQVARLVAV AEALDTPGFA ALERRSAPLG EIADILRCHP
QGYVDRVRAA IPEEGAGVVS LDADTHVMSG SWNAALRGVG GVCAAVDAVL AGEVGNAFVA
CRPPGHHAET ETAMGFCLFG NIAIGAKRAL DHHGLSRVAV VDFDVHHGNG TQDLLWDEAR
AFFISSHQMP LYPGSGARHE TGAHGNVFNL PFPPDTAGPA FRRQYEAEVF PALENFRPEL
ILVSAGFDAH RADPLAQMAL VEEDFAWVTG RLCEIAAEFC DGRVVSTLEG GYDLPALGAS
TAAHVKTLME HAQ
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