Gene Dshi_3290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3290 
Symbol 
ID5712347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3456894 
End bp3457313 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content69% 
IMG OID641269218 
Producthypothetical protein 
Protein accessionYP_001534624 
Protein GI159045830 
COG category[R] General function prediction only 
COG ID[COG3324] Predicted enzyme related to lactoylglutathione lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTACG ACACGGTCGA TGCGGTCACG TTCGGGCGCA GCCTGCGCGG CTTGGGGATC 
AACCTGCTGG TACAGGACGC CCAACGCAGC GTCGCGTTCC TGACCGAGGT GTTCGGCATG
ACCGCCCACC AGCCGACCCG GGACTTCGCG ATCCTGACCT ATGGGGACGC CGTGTTCCAG
ATCCACGCCG ATGCCACCTA CCACGCCCAT CCCCTGCCCA GCCTGCTTCC CGAAAGCGGC
CCGCGCGGCG GCGGGGTGGA ACTGCGGCTC TATGACTGTG ACCCGGATGC GGCCGCCGCA
CGCGCCGAAG CCGCAGGAGG GCTGATCCTG CAAGGCGCGA CCGACAAGCC CCACGGGCTG
CGCGAAGCGG TGATCCTCGA TCCCGATGGC TACGCCTGGG TGCCCAGCCG CGCGCTCTGA
 
Protein sequence
MQYDTVDAVT FGRSLRGLGI NLLVQDAQRS VAFLTEVFGM TAHQPTRDFA ILTYGDAVFQ 
IHADATYHAH PLPSLLPESG PRGGGVELRL YDCDPDAAAA RAEAAGGLIL QGATDKPHGL
REAVILDPDG YAWVPSRAL