Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3290 |
Symbol | |
ID | 5712347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 3456894 |
End bp | 3457313 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641269218 |
Product | hypothetical protein |
Protein accession | YP_001534624 |
Protein GI | 159045830 |
COG category | [R] General function prediction only |
COG ID | [COG3324] Predicted enzyme related to lactoylglutathione lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTACG ACACGGTCGA TGCGGTCACG TTCGGGCGCA GCCTGCGCGG CTTGGGGATC AACCTGCTGG TACAGGACGC CCAACGCAGC GTCGCGTTCC TGACCGAGGT GTTCGGCATG ACCGCCCACC AGCCGACCCG GGACTTCGCG ATCCTGACCT ATGGGGACGC CGTGTTCCAG ATCCACGCCG ATGCCACCTA CCACGCCCAT CCCCTGCCCA GCCTGCTTCC CGAAAGCGGC CCGCGCGGCG GCGGGGTGGA ACTGCGGCTC TATGACTGTG ACCCGGATGC GGCCGCCGCA CGCGCCGAAG CCGCAGGAGG GCTGATCCTG CAAGGCGCGA CCGACAAGCC CCACGGGCTG CGCGAAGCGG TGATCCTCGA TCCCGATGGC TACGCCTGGG TGCCCAGCCG CGCGCTCTGA
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Protein sequence | MQYDTVDAVT FGRSLRGLGI NLLVQDAQRS VAFLTEVFGM TAHQPTRDFA ILTYGDAVFQ IHADATYHAH PLPSLLPESG PRGGGVELRL YDCDPDAAAA RAEAAGGLIL QGATDKPHGL REAVILDPDG YAWVPSRAL
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