| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3289 |
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| Symbol | amn |
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| ID | 5712346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3455298 |
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| End bp | 3456767 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641269217 |
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| Product | AMP nucleosidase |
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| Protein accession | YP_001534623 |
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| Protein GI | 159045829 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0775] Nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR01717] AMP nucleosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.264464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCAGA CGCTGAAGAC CCCTCCGCGG ACCCTGCCGC GCAGCTTTGA CGATGCCGCT
GCCGCGGTGG CCGAGTTGCA GCGCCTTTAT GACGAGGGTG TCCTGTTCTT GCAGACCAGC
TTCGCAGATG CGGTGCGCGA GGGCGCGGTT TCGGCACGCT ACCGGGCGTT TTACCCGGAG
ATCCGGGTAC GGGTGAGCAG CTTCGGGCAG GTGGACAGTC GGCTGTCCTT CGGCCATGTC
GCCGAGCCCG GCAGCTATGC CACGACCGTC ACGCGCCCGG ATCTGTTCGC GAACTACCTG
ACACAGCAGA TCGGCCTTCT GATCCGCAAT CACGGGGTGC CCATCGAGAT CGGGCAGTCC
GAGACGCCGA TCCCGCTGCA TTTCGCCATG GCGGGCGGGC CGGTGGCCTC GATCCCGCAG
GAAGGCGTTC TGGCCTTCAC CCTGCGCGAT GCCTTCGACG TGCCGGACCT GGCCACCACC
AACGACCAGA TCGTCAACGG CTACGGCTTC AAGCACGAAG ACGGCGCGGG CCCGCTGGCG
CCCTTCACGG CGCAGCGGAT CGACTATTCG CTGGCGCGGC TGCAGCATTA CACCGCCACC
AAGGCGGAGC ATTTCCAGAA CCATGTCCTG TTCACCAACT ACCAGTTCTA CGTGGACGAG
TTCATCGCCT TCGCCCGCAA GGCGCTGGCC GATCCCGACA GCGGGTATCA AAGCTTCGTG
GCCCCGGGCA ACGTGGAGAT CACCGACCCG GACGCGGAAT TGCCGGTGCT GCCGAAGGCA
CCGCAGATGC CGACCTATCA CCTGACCCGC AAGGGGCAGG CAGGGATCAC GCTGGTCAAT
ATCGGGGTGG GGCCGTCCAA CGCCAAGACC GCGACCGACC ATATCGCAGT GCTGCGGCCC
CATGCCTGGC TGATGCTGGG GCATTGCGCG GGGCTGCGGA ATACCCAGAG CCTGGGCGAT
TACGTTCTGG CCCATGCCTA TCTGCGCGAG GATCACGTGC TGGACGACGA TCTGCCGATC
TGGGTGCCGA TCCCGGCCCT GGCGGAGATC CAGATCGCGC TGGAGCAGGC GGTGGCGGAG
GTGACCAAGC TGGAGGGCTA TGACCTCAAG CGGATCATGC GCACGGGCAC GGTGGCCACC
ATCGATAACC GCAACTGGGA GCTGCGCGAC CAGTCCGGCC CGGTCCAGCG CCTCAGCCAG
TCCCGCGCCG TGGCGCTGGA CATGGAAAGC GCCACGATCG CCGCCAATGG ATTCCGGTTC
AGGGTGCCTT ACGGCACGCT GCTATGCGTG TCGGACAAGC CGCTCCATGG GGAGTTAAAG
CTGCCGGGCA TGGCGACGGA GTTCTACACC ACCCAGGTGG CCCGGCATCT GCTGATCGGG
ATCCGGGCAA TGGAGACGAT CCGCGACATG CCGCTGGAGC GTATCCATTC CCGGAAACTG
CGCAGTTTCG AGGAAACCGC GTTTCTTTAA
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| Protein sequence | MTQTLKTPPR TLPRSFDDAA AAVAELQRLY DEGVLFLQTS FADAVREGAV SARYRAFYPE
IRVRVSSFGQ VDSRLSFGHV AEPGSYATTV TRPDLFANYL TQQIGLLIRN HGVPIEIGQS
ETPIPLHFAM AGGPVASIPQ EGVLAFTLRD AFDVPDLATT NDQIVNGYGF KHEDGAGPLA
PFTAQRIDYS LARLQHYTAT KAEHFQNHVL FTNYQFYVDE FIAFARKALA DPDSGYQSFV
APGNVEITDP DAELPVLPKA PQMPTYHLTR KGQAGITLVN IGVGPSNAKT ATDHIAVLRP
HAWLMLGHCA GLRNTQSLGD YVLAHAYLRE DHVLDDDLPI WVPIPALAEI QIALEQAVAE
VTKLEGYDLK RIMRTGTVAT IDNRNWELRD QSGPVQRLSQ SRAVALDMES ATIAANGFRF
RVPYGTLLCV SDKPLHGELK LPGMATEFYT TQVARHLLIG IRAMETIRDM PLERIHSRKL
RSFEETAFL
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