Gene Dshi_3279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3279 
Symbol 
ID5712336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3444069 
End bp3444680 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content68% 
IMG OID641269207 
Productputative glutathione S-transferase family protein 
Protein accessionYP_001534613 
Protein GI159045819 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.970815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAAC TTTTCGGGGC GCCCGCCTCG CCCTTCGTCC GGAAGGTGCG GGTTCTTCTG 
GCCGAGACCG GTTATGACGA CATGGTGACC TTCACCCCCG TGGCCACGGC CGTGGTGGGC
GAAGCCGATG CCGCGATCAA GGCGGCCAAC CCCCTGGGCA AGATCCCGGC GCTGCAACGG
CCCGACGGGC CTGCGTTGTA CGACAGCCGC GTGATCTGCC GCTATCTGGA TGCGAAATTC
ACCCTGGAGG CCTATCCCGC CTCGCGCCTG TGGGAGGTGC TGACCCTGGA GGCGACGGCC
GACGGGATCA TGGATGCGGG TGTCCTGATG GTCTACGAAC GCCGCTTCCG CCCGGCGGAA
AAACAGGACG ACGCCTGGAT CGACGGGCAA TGGGCCAAGA TCGCCCGCGC ACTCGACGCG
ATCGAGGACC GTTGGATGAG CCATCTCGCC GCCCCGATCG ACATGAGCCA GATCGCCGTG
GGCTGCGCGC TGGGCTATCT CGACTTCCGC CACGCGGATC GGTCCTGGCG CGAGGGACGG
CCGGCGCTGG CGGCCTGGGC GGACACGTTC CTGGCACGGG AGGCAATGAT CGCGACGACC
CCGTCGAACT GA
 
Protein sequence
MMELFGAPAS PFVRKVRVLL AETGYDDMVT FTPVATAVVG EADAAIKAAN PLGKIPALQR 
PDGPALYDSR VICRYLDAKF TLEAYPASRL WEVLTLEATA DGIMDAGVLM VYERRFRPAE
KQDDAWIDGQ WAKIARALDA IEDRWMSHLA APIDMSQIAV GCALGYLDFR HADRSWREGR
PALAAWADTF LAREAMIATT PSN