| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3278 |
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| Symbol | petA |
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| ID | 5712335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3443243 |
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| End bp | 3443800 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641269206 |
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| Product | ubiquinol-cytochrome c reductase |
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| Protein accession | YP_001534612 |
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| Protein GI | 159045818 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0723] Rieske Fe-S protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTCCCACG CAGAGGATCA GACCGGCACA CGCCGGGACT TTCTGTACTA TGCTACGGCC
GGCGCAGGTG CCGTCACCGC AGGCGCGGCC ATCTGGCCGC TCGTGAACCA GATGAACCCT
TCCGCCGACG TTCAGGCGCT GTCCTCGATC CTGGTCGATA TCGGTGAGGT TGCCGAGGGG
ACGCAGATTT CCGTGATGTT CCTCGGCAAG CCGGTGTTCA TCCGCCGCCG CACCGCGGCC
GAGATCGAAG ACGCCCGGTC CGTGTCGCTG GACGATCTGC CGGACCCCGT GGCCCGGAAC
GAAAACAACG AAGGCGCGCC GGCGACCGAC GAGAACCGGT CCTACGGCGA AAATGGCGAA
TGGCTGATCA TGCAGGGCGT GTGTACGCAC CTGGGTTGCG TGCCGCTCGG CGATGCCGGT
GACTTCGGCG GCTGGTTCTG CCCCTGCCAC GGCTCGCATT ACGACACCTC GGGCCGCATC
CGTCGCGGGC CCGCCCCCGA GAACCTGCCC GTTCCGCTGG TAGAGTTTAT CGACGAAACA
ACAATTCAAC TCGGTTAA
|
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| Protein sequence | MSHAEDQTGT RRDFLYYATA GAGAVTAGAA IWPLVNQMNP SADVQALSSI LVDIGEVAEG
TQISVMFLGK PVFIRRRTAA EIEDARSVSL DDLPDPVARN ENNEGAPATD ENRSYGENGE
WLIMQGVCTH LGCVPLGDAG DFGGWFCPCH GSHYDTSGRI RRGPAPENLP VPLVEFIDET
TIQLG
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