Gene Dshi_3271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3271 
Symbol 
ID5712328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3435991 
End bp3437064 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content68% 
IMG OID641269199 
Producthypothetical protein 
Protein accessionYP_001534605 
Protein GI159045811 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0489] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCA CCCGCGACGC CGTTCTTGAA ACCCTCAAAC AGGTGAAGGA CCCGCTCGGT 
GGCGGGGACC TCGTCTCGGC TGGTATGATC CGCGCTCTGA CGGTGGATGA CGGCGTCGTC
CGCTTCGTGA TGGAGGTGGA CCCCAAGCGT GCCGCCGAGG TCGAACCGGC CCGGGCCGAG
GCCGAAGCCA GGCTCAAGGC GCTGGCGGGG GTCGCCAGCG TGTCGGCGGT GATGACCGCC
CATGCCGCCC CCGCCGCGCC ACCGGAGTTG AAACCGCAGA GCGCCAAGGC CGCCGGGCCG
GCGGGGCCGC AGAAGATCCC GGGCATCGAC CGCATCCTCG CGATTGCCAG CGGCAAGGGC
GGGGTGGGCA AGTCCACGGT CGCCTCGAAC CTTGCCACCG CACTGGCGGC CGAGGGGCGG
CGCGTCGGGC TGCTCGATGC GGATGTCTAC GGGCCGAGCC AGCCGCGTAT GCTTGGCGTG
TCCGGTCGCC CGGCCAGCCC CGATGGCAAG ACCATCCTGC CCCTGCGCAA CCATGGCGTC
ACGCTGATGT CCCTCGGCCT GATGACGGGC GAGAACGAGG CGGTGGTCTG GCGTGGCCCG
ATGCTCATGG GCGCGCTGCA GCAGATGCTC ACCCAGGTGC AATGGGGCGC GCTCGACGTG
CTGCTGGTGG ACCTGCCCCC GGGCACGGGC GACGTGCAGA TGACCCTCGC CCAGAAGGCC
GAAGTGACCG GTGCGATCAT CGTCTCGACG CCGCAGGACA TCGCCCTGCT CGATGCCCGC
AAGGGGATCG ACATGTTCAA CAAGCTGGGT ACGCCGATCC TGGGGATGAT CGAGAACATG
AGCACCCATA TCTGTTCCCA ATGCGGCCAC GAGGAACATG TCTTCGGCCA TGGCGGCGTG
CGGGACGAGG CCGCCAAGCT CGGCGTGCCG GTGATGGCGG AAATCCCGCT CGACATGTCG
ATCCGCATGG CCGCCGATGG CGGAACACCC ATCGTGGTGT CCCATCCACA AAGCCCGCAG
GCTGAGTCCT TTCGAATGAT CGCGCGTCAA CTCATCGCGG ACGGGAACGC ATGA
 
Protein sequence
MSVTRDAVLE TLKQVKDPLG GGDLVSAGMI RALTVDDGVV RFVMEVDPKR AAEVEPARAE 
AEARLKALAG VASVSAVMTA HAAPAAPPEL KPQSAKAAGP AGPQKIPGID RILAIASGKG
GVGKSTVASN LATALAAEGR RVGLLDADVY GPSQPRMLGV SGRPASPDGK TILPLRNHGV
TLMSLGLMTG ENEAVVWRGP MLMGALQQML TQVQWGALDV LLVDLPPGTG DVQMTLAQKA
EVTGAIIVST PQDIALLDAR KGIDMFNKLG TPILGMIENM STHICSQCGH EEHVFGHGGV
RDEAAKLGVP VMAEIPLDMS IRMAADGGTP IVVSHPQSPQ AESFRMIARQ LIADGNA