| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3269 |
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| Symbol | |
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| ID | 5712326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3433959 |
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| End bp | 3435065 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641269197 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001534603 |
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| Protein GI | 159045809 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCTT TGGAAGGCCT GAAAGTCGTC GAACTGGCAC GCATCCTTGC CGGTCCCTGG
ATCGGCCAGG CGCTCGCGGA TCTCGGCGCC GAGGTGATCA AGGTCGAAGC GCCCCAGGGC
GACGACACCC GCACATGGGG CCCCCCCTTC ATCACCCGCG ACGGCGACCG CTCTGCGGCT
TATTTCTATG CCGCCAATCG GGGCAAGCGG TCTGTGGTAG CCGATTTCCG CACCGAGGCG
GGGCAGGCAA AGGTGCGCGA CCTGGTCGCC GACGCCGATA TTCTGATCGA GAATTTCAAG
GTCGGCGGGC TGGCCAAATA CGGACTGGAT TATGCCGCGC TGGCCGCGAT CAACCCCCGC
CTGATCTATT GCTCGGTCAC CGGGTTCGGT CAGGATGGGC CCTATGCCCA TCGCGCGGGC
TACGACTTCA TGATCCAGGG CATGAGCGGG CTGATGTCGA TCACCGGCGA GCCGGACGCC
GCGCCCCAGA AGGTCGGCGT GGCGGTGACC GACATCGTCA CCGGCCTTTA CGGGACGATC
GGCATCCTCG CGGCGGTCGA GCAGCGCCAT CGCACCGGGC GGGGGCAGCA TCTCGACATG
GCCTTGCTCG ATTGCGCCAC GGCGCTTCTG GCCAACCAGG CAATGAACCA ACTCGCCACC
GGGACAGCGC CCACGCGGCT CGGCAACGCG CACCCCAACA TCGTGCCCTA CCAGGTCTTC
GAGGCTGCGG ATGGGCACAT GATCCTTGCG GTCGGAAATG ACGGACAGTT TGCGAGCCTG
TGCGAGATCC TCGATCTGCC CGGCACCGCC TCGGACCCGC GGTTCGCCAC CAACGCGGGC
CGGGTCGAAA ACCGCGATGC GCTGACCGAG TTGCTGAGCC TGCGTTTGCG GGGCTGGTCC
GTGGCGCAAC TGCTTTCGGC GCTGGAGGCC GCGGGCGTCC CCGCAGGCCC GATCAACACC
ATCGACCAGG TCTTCGCCGA CCCGCAGGTG CAGGCCCGCG GCCTGCAGGT TTCTGTCGAA
GGTGTGCCTG GGGTGCGCGG GCCGTGGCGG TTTTCCGATG CGGAGCTGTC CCTAGATCGG
ACCGCGCCCA AGCTGCCCGA CCCCTAA
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| Protein sequence | MTPLEGLKVV ELARILAGPW IGQALADLGA EVIKVEAPQG DDTRTWGPPF ITRDGDRSAA
YFYAANRGKR SVVADFRTEA GQAKVRDLVA DADILIENFK VGGLAKYGLD YAALAAINPR
LIYCSVTGFG QDGPYAHRAG YDFMIQGMSG LMSITGEPDA APQKVGVAVT DIVTGLYGTI
GILAAVEQRH RTGRGQHLDM ALLDCATALL ANQAMNQLAT GTAPTRLGNA HPNIVPYQVF
EAADGHMILA VGNDGQFASL CEILDLPGTA SDPRFATNAG RVENRDALTE LLSLRLRGWS
VAQLLSALEA AGVPAGPINT IDQVFADPQV QARGLQVSVE GVPGVRGPWR FSDAELSLDR
TAPKLPDP
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